Eucalyptus grandis (rose gum): 104422623
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Entry
104422623 CDS
T03547
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104422623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104422623
03016 Transfer RNA biogenesis [BR:
egr03016
]
104422623
Enzymes [BR:
egr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
104422623
Messenger RNA biogenesis [BR:
egr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
104422623
Transfer RNA biogenesis [BR:
egr03016
]
Prokaryotic type
tRNA degradation factors
104422623
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
S1_RRP5
OB_PDCD11
KH_1
Urease_gamma
PCB_OB
KH_PNO1_2nd
FlgH
CvfB_2nd
Motif
Other DBs
NCBI-GeneID:
104422623
NCBI-ProteinID:
XP_010033299
UniProt:
A0ACC3J7I4
LinkDB
All DBs
Position
10:28586515..28596014
Genome browser
AA seq
947 aa
AA seq
DB search
MAMASIATRARKPNLLPWRSLSFRATRGGRLGLASFSSSSSTLSDPELEPPPPPPPPSPS
PAAGAKVLESFTEEFEIGSRLITLETGKIARFANGAVVLGMEDTKVLSTVTSSRGDAVGS
FLPLTVDYQEKQYAQGLIPKTYTRREGAPKERELLVGRLIDRPIRPLFPAGFFHEVQVMA
SVLSSDGKQDPDVMAANATSAALMLSDIPWGGPIGVIRIGRICGKFIINPTMEELNLSDL
KLLYACTKDKTLMIDVQAREISEKDLEAGLRLAHPEAVKYLEPQMRLAAKAGKTKKEYKL
SMISDRTLEKVRNLAEAPIEAVFTDPSYGKFERGEALDNITQDVKKALEEEGDEESLLVL
PRAVDTVRKKVVRKRIIAEGLRVDGRRLDEVRPVYCEAGYLRMLQGSSIFSRGDTQVLCT
VTIGAPGDAQKLDSIVGPPSKRFMLHYTFPPFSINEVGKRVGLNRREVGHGTLAEKALLA
VLPPEDFFPYTVRVNSEVMASDGSTSMATVCGGSMALMDAGIPLREHVAGVSVGLVSEVD
PVTGEITDYRILTDILGLEDHLGDMDFKIAGTRKGVTAIQLDIKPAGIPLDIICECLEPA
HKGRLQILGHMEREIRLPRTQDDRNTPQLATLKFGNEALRRLIGPLGVLKRRIEEETGAR
LSVSDGTLTIVAKNPTVMEKVQEKIEFTVGREMEVGGTYKGIVTSVKEYGAFVELNGGQQ
GLLHVSELSHEPVSRVSDVVSVGQQLTVMCIGQDVRGNIKLSLKATSPRQASEPNNVVKQ
AVPIWPSVKDGPSSQEQDSKEESSSQSMESYTSRAPSILIRSAAECEEEEKSAGLLETLK
NSKLSKKSASSTEKRSELKSTFTGEGDEETEKEAPTAKNLKLGMRVTAKVHKVLGRGLVL
DLGNGVRGMYRFEGEGKADYEVGDLLRVVCTSFSSKGVPVMSLLKDD
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcttccatcgcgacgagagccaggaagccgaacctcctcccctggcggtcc
ctgagcttccgcgcgacccgcggtggccgcctcggcctcgcctccttctcttcctcctct
tccacgctgtccgaccccgagctcgagccgccgccgccgccgccgccgccgtcgccttct
cccgccgcgggtgccaaggtcctggagagcttcacggaggagttcgagatcggctcccgc
ctgatcacgctcgagaccgggaagatcgcccggttcgcgaacggcgccgtcgtgctgggc
atggaagacaccaaggtcctgtccaccgtcacgtcctccaggggcgatgctgtcgggagc
ttcttgcctctcactgttgattatcaagagaagcagtatgcccaaggtctgatcccaaaa
acatatacgcggcgagagggtgctccaaaagagcgtgaacttttagttggtcgacttatt
gatagaccaataagaccgttatttcctgctgggttttttcatgaagtccaggtaatggca
agcgttctttcctctgatgggaaacaagatccagatgtaatggcagctaatgcaacatct
gctgctcttatgttatcagatatcccttggggaggtccaattggagtgatacgcataggg
aggatttgtgggaagttcatcattaatcccaccatggaggagctcaatttaagtgacctg
aaattactatacgcatgcacaaaggacaaaactttgatgatagacgtgcaagctcgtgag
atatcagagaaagatttagaagctggcttgagactagcgcatccagaggctgtgaagtac
cttgaacctcaaatgagattggctgcgaaagctggcaaaactaagaaggaatataagctg
tctatgatctcagatagaactctcgaaaaagttcgcaacctggcagaagctcctattgaa
gctgtttttactgatccttcatatggcaagtttgaacgtggagaagccttggacaacata
acccaagatgtaaaaaaagcacttgaagaagaaggtgatgaagaaagcttattggtgttg
cctagagcagtagatactgtgaggaagaaggttgtccgcaagaggataattgcagaagga
cttagagttgatggcagacgccttgacgaagtcagacctgtgtactgcgaagctggctat
ctgcgtatgttgcagggatcatcgatattttctcgcggagatacgcaggtgctttgtact
gtgacaattggtgccccaggggatgctcaaaagttggattcaattgtgggtcccccaagc
aagcgttttatgcttcattatacctttccgccattttcaattaatgaggttggcaaaaga
gttgggctaaatagacgtgaagttgggcatggaactctagctgagaaagccctccttgca
gttttacctcctgaagatttcttcccctatactgtgcgtgttaattcagaagtcatggcc
tctgatggttcaacgtcaatggcaactgtctgtggaggcagtatggcgctcatggatgct
ggcattccattaagagaacatgtagcaggtgtttcagtgggtcttgtcagtgaagttgat
ccagtgacgggggaaataactgattaccggatacttactgatatacttggtctggaagat
catctcggagatatggacttcaaaattgctggcactagaaagggagttacggctattcaa
ctggacataaaaccagctggaatacctctggacatcatttgtgaatgtttagaacctgct
cataaaggtcgtctgcaaattttgggccacatggagagagaaatcagattaccgcgtacc
caagatgatagaaatactcctcaattagcaactctgaagttcggcaatgaagctctccgt
cgtttgattggccctcttggtgttttaaagagaaggattgaggaggaaacaggtgcacga
ttatctgtgagtgatggaacactgaccatagttgctaagaacccaactgtaatggagaag
gtgcaagaaaagattgaatttaccgttggccgtgagatggaggttggaggtacttacaaa
ggcattgtaacttcagtcaaggaatatggtgcttttgtggagttaaatggtggccagcaa
ggcctgctgcacgtttctgagttatcacatgaaccggtatctcgagtttcggatgttgtt
tcggtgggccagcagctgacagtcatgtgcatagggcaggatgtccgtggcaatattaaa
ttatccctcaaagcaacttcaccccgacaagcatcagagccaaataatgtagttaagcaa
gctgttcctatatggccgtctgtcaaagatgggcctagtagtcaagaacaagattccaag
gaagagagttcttcccaaagcatggagagctatacatcccgtgcaccatctatcttaatt
cgaagtgctgctgagtgtgaggaagaggagaaatctgctggtctgcttgaaactctgaaa
aattctaagttgagtaagaagtcagcgagttctactgagaagagaagcgaattaaagtcc
actttcactggagaaggtgatgaagaaactgagaaagaggctcccactgccaagaatttg
aagcttgggatgagggtaactgccaaggtccataaagttcttggacgagggttagtcctt
gacttgggtaatggtgttcgtggaatgtaccggtttgagggagaagggaaggcggactat
gaagtaggtgatttgctgagagtggtgtgtacaagcttctccagcaagggagttcctgtt
atgtctcttttgaaagacgattag
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