KEGG   Eucalyptus grandis (rose gum): 104422631
Entry
104422631         CDS       T03547                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104422631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104422631
   03036 Chromosome and associated proteins [BR:egr03036]
    104422631
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     104422631
Chromosome and associated proteins [BR:egr03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     104422631
    COMPASS/SET1 complex (yeast)
     104422631
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_IFT122_1st WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR3_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_EIPR1 Tricorn_2nd Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_Nup120_160 PAC11 PD40 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 104422631
NCBI-ProteinID: XP_010033311
LinkDB
Position
10:28648486..28652996
AA seq 333 aa
MATIAALDDDMVRSMSIGAVFSDFVGKLNSLDFHRKDDILVTAGEDDSVRLYDIANARLL
KTTFHKKHGTDRVCFTHHPNSLICSSTKNLDTGESLRYISMYDNRSLRYFKGHKQRVVSL
CMSPINDSFMSGSLDHSVRMWDLRVNACQGILRLRGRPTVAYDQQGLVFAVAMEGGAIKL
FDSRSYDKGPFDAFLVGGDTSEVCDIKFSNDGKSVLLSTTNNNIYVLDAYAGDKQCGFNL
EPSPSTPIEASFSPDGQYVVSGSGDGTLHAWNISRRNEVACWNSHIGVASCLKWAPRRAM
FVAASTVLTFWIPNSEPELASAKGEAGVPPEQV
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcaacgatcgcggcgcttgacgacgacatggtccgcagcatgtcgatcggagccgtt
ttctccgacttcgttgggaaattaaattcgcttgattttcaccgtaaggatgatattttg
gtcacggccggcgaggatgattcagtgagattgtatgatattgcaaatgccaggttgctc
aagaccacctttcacaagaaacatggcactgatcgtgtgtgctttactcatcatccaaac
tccctcatatgctcttcaaccaaaaacttagatactggagagtccttaagatatatatca
atgtatgataaccgaagcctccgctactttaagggacacaaacagagagttgtttccctg
tgcatgtctccaatcaatgatagcttcatgtcaggctctcttgaccacagcgtgagaatg
tgggatctccgtgtgaatgcttgccagggaattctgcgtctacgtggcagacctactgtt
gcatatgaccagcagggtcttgtctttgctgtagctatggaagggggtgctatcaaattg
tttgattcacgctcttacgacaagggcccctttgatgcctttttagttggtggagataca
tctgaggtctgtgatatcaagttcagcaatgatggaaaatcagtgctattatcaaccaca
aacaacaacatctatgttctcgatgcatatgcaggagataagcaatgtggattcaattta
gaaccatctccaagtacaccgatagaggcaagtttttcaccagatggccagtacgttgta
tcaggctcaggagatggaactttgcatgcatggaatatcagcaggcgaaatgaggtagca
tgttggaatagccatattggcgtcgcatcatgcttgaaatgggctcctcgtcgggccatg
ttcgtagcggcatctactgtcctcactttctggattccaaattccgagcccgagcttgct
tctgccaaaggcgaggccggagttccaccagaacaagtttaa

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