Eucalyptus grandis (rose gum): 104422645
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Entry
104422645 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104422645
03012 Translation factors [BR:
egr03012
]
104422645
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104422645
Translation factors [BR:
egr03012
]
Eukaryotic type
Initiation factors
eIF-3
104422645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Tricorn_2nd
ANAPC4_WD40
RRM_1
Beta-prop_ELP1_1st
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
104422645
NCBI-ProteinID:
XP_018719732
UniProt:
A0ACC3J845
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All DBs
Position
10:complement(28783785..28789383)
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AA seq
714 aa
AA seq
DB search
MADALIEERAALMGIDMSQIDLDSVQLPPGEDFGIISDDDDLYQEDTLELDTGLGNIIIV
DNLPVVPREKFDKLEGVVRKIYSQIGVIKDDGLWMPVDPDTQKTLGYCFIEYNTAQEAEL
AKEKTNGYKLDRSHIFAVSMFEDFDRFMRVPDEWAPPETKPYTPGENLQQWLTDEKARDQ
FVIRAGSDTEVLWNDARQLKPEPVHRRAFWTESFVQWSPLGTYLATVHRQGSAVWXGAST
FNRLMRYAHPQVKLIDFSPSEKYLVTYSSHEPSNPRDPQRVVINIFDVRTGKIMRDFKGS
ADDFAVGGTGAVTGVSWPVFRWGGGRDDKYFARIGKSVVSVYETETFSLIDKKSLKVENV
MDFNWSPTDPILALYVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNGDY
LAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHG
DGPRPDVSFYSMRSGNNTGRVSKLTTLKGKQANFLFWSPAGRYIILAGLKNFNGQLEFYN
VDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRILKDHFF
QFLWRPRPPSLLSPEKEEEIAKNLKKYSKKYEAEDQDVSMLLSEQDREKRKMLKDEWEKW
VSRWKQMQEEEKLERQNLRDGEASDEEEEYEAKEVEVEELLDVSEEVLSFDYEE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcgttgatagaggaaagggctgcgttgatggggatagacatgtcccagatt
gatctcgattcggttcagctccctccaggggaagatttcggcatcatcagtgatgatgat
gatctttatcaggaggatactttggagttggatacagggttgggaaatattattattgtt
gataatctccctgttgttccccgtgagaaatttgacaagcttgaaggcgttgttcgcaaa
atctatagtcagattggtgtgattaaagacgatggcctttggatgcctgttgatccagat
acacagaagactctaggatactgctttatcgagtacaacactgctcaggaagctgagctt
gccaaagagaagacgaatgggtataagttggatagatcccatatttttgccgtaagcatg
tttgaggactttgataggtttatgagagttcctgatgaatgggcacctcccgaaacaaag
ccatacaccccaggggagaatcttcagcagtggctcaccgatgaaaaagctcgtgatcag
tttgtcattcgtgctggctcagatactgaggttctgtggaatgacgctagacagttgaag
cccgagcctgtccacagacgtgctttctggacagagagttttgtgcaatggtcgcccctg
ggaacttatttagcaacagtgcaccggcagggttctgcagtttggngaggcgcctctacc
tttaatcgtctgatgcgctatgctcatcctcaggtgaaactgattgatttttcacctagt
gagaaatatttggtgacgtatagcagccatgaaccaagcaatccccgagatcctcagagg
gttgtgataaatatttttgacgtgagaacggggaaaataatgagagatttcaaaggaagt
gctgatgattttgctgttggtggaactggagctgtcacaggagtctcttggcccgttttc
aggtggggtggaggaagagatgacaagtacttcgctcgaattgggaaaagtgttgtctct
gtctatgaaacagaaaccttttcactcattgacaagaaatctctgaaagttgaaaatgtg
atggactttaactggtctccaaccgatcccattttagcgctgtatgttcctgaacttggt
ggtggaaaccaaccagctagggtgagccttgtccaaatacctagcaaggaggaactgcga
cagaagaatcttttcagcgttagtgattgcaagatgtattggcagagcaatggggactat
ctagctgtcaaggtggaccgttatacgaaaacaaagaagagtacttacacaggctttgag
ctcttcagaatcaaagaacgagatatacctattgaggttttggagcttgagaataagaat
gacaagattattgccttcgcttgggagcccaagggccatagatttgcagtaatccatggt
gatggtccacggcctgatgtgagcttctactcgatgaggagtggcaataacacaggccgt
gtttcaaagctaaccaccctcaaggggaagcaagcaaattttcttttctggtcacctgct
ggtcgctacattatacttgctggattaaaaaatttcaatggtcagttggaattttacaat
gtggatgagcttgaaaccatggctacagcagagcatttcatggcaacagatattgaatgg
gatcctacaggaagatatgttgcaacagctgtgacttcagtacacgagatggaaaatggt
ttcaacatatggtcctttaatggcaagcttctgtaccggattctgaaggatcatttcttt
cagtttttatggcgcccgaggccaccatcattgctaagtcctgagaaggaagaagagatc
gcaaagaacttgaagaagtacagcaagaagtatgaggcagaggatcaggatgtgtcaatg
ctgttgagcgagcaggaccgtgagaagcgcaagatgttgaaggatgaatgggaaaaatgg
gtaagcaggtggaagcagatgcaggaagaggagaagttggagagacagaacctgagagat
ggagaagctagtgatgaggaagaagagtatgaagcgaaagaagtagaggtcgaggaatta
ttggatgtttctgaggaggttctttcttttgactacgaggagtga
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