Eucalyptus grandis (rose gum): 104422708
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Entry
104422708 CDS
T03547
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104422708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104422708
03036 Chromosome and associated proteins [BR:
egr03036
]
104422708
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104422708
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104422708
PBAF complex
104422708
GBAF(ncBAF) complex
104422708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
104422708
NCBI-ProteinID:
XP_010033417
UniProt:
A0A059AHA8
LinkDB
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Position
8:8277578..8280492
Genome browser
AA seq
540 aa
AA seq
DB search
MSMNNNSNPSRNLPASSSPFGNAAILNSAMPTNPGFGQAQGQGGPGFQAAQFQLSQAQAI
AQAQAKAQAHAQAQMQGVNPQFQAQLQASLSQMGGLGNLGSSSPSMSTPGSGGMKRLPQK
PPMRPPGVSMNTMISPLKQMELASAARKKKQKVPEKQLQDRVAAILPESALYTQLLEFES
RVDAALARKKTDIQEALKNPPCIQKTLRIYVFNTFANQIRTIPQKPNAEPPTWTLKIIGR
ILEEGVDPDQPGVVQKSSPLYPKFSSFFKRVTISLDQRLYPENPVIVWENSRSSAPQEGF
EVKRKGDKEFTVTIRLEMNYVPEKFKLSPALMEVLGIEVETRPRIITAIWHYVKARKLQN
PNDPSFFNCDPPLQKVFGEEKTKFTTVSQKISNHLSSPQPIHLEHKIKLSGNNPAGTACY
DVLVDVPIPIQRELSVLLANVEKNKEIDACDEAIYSAIRKIHEHRKRRAFFLGFSQSPVE
FINALIESQSKDLKLLSGEASRSAEKERRSDFFNQPWVEDAVIRYLNRKPATGSDAHPST
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaataacaatagtaacccgtctagaaaccttccggcttcttcatctcctttt
ggaaatgctgccatcttgaactcggctatgccgacaaacccagggttcgggcaagcgcag
ggtcaaggtgggcccgggtttcaagcagcgcagtttcagctgtcacaagcgcaagccatc
gctcaggcgcaggcgaaggcacaggctcatgcgcaggctcaaatgcaaggggtgaacccc
cagttccaggcgcagctgcaagcttccctcagtcagatggggggccttgggaatttgggt
tcgtcttcgccctccatgtccacgcctggaagtggcggcatgaagcgtttgcctcaaaaa
cccccaatgcgacctcctggagtctctatgaacaccatgatttcaccattgaaacaaatg
gagcttgcttcagctgctcgcaagaagaagcagaaggtccctgagaagcagctacaagac
agagtggcagcaattcttcccgagtctgcattgtacacacagctccttgagttcgagtct
cgcgttgatgctgctcttgcgagaaagaagactgacatacaggaagccctgaagaaccct
ccatgcattcagaaaacacttaggatttatgtcttcaatacatttgccaaccagattcgc
acaatacctcagaagccaaatgctgagccacctacttggacccttaagataattgggagg
atcttggaggaaggggtggatcctgatcagcctggagtagttcagaaatcaagcccttta
tacccaaagttttcatctttcttcaagagagtaaccatttctttggaccagcgactttat
cctgaaaaccctgtgattgtttgggagaactctagatcatctgctcctcaagagggattt
gaggtgaagcggaaaggggataaagaatttacagtgactatccggttggaaatgaattat
gtgcctgagaaattcaagctgtcgccagctttgatggaagttcttggcatcgaagttgag
actagaccaagaattattactgcaatctggcattatgtgaaggccaggaaattgcagaac
ccaaatgatccctcattttttaactgtgacccgcctcttcagaaagtgtttggggaagag
aagacgaaatttactacggtttctcagaagatctccaatcatttatcttcaccacagccg
atacatttggagcacaaaatcaagctttcaggaaataatccagctggaactgcatgctat
gatgtgctggttgatgtgcccattcccattcagagggagctgtctgtgctgttagcgaat
gtggagaagaacaaagagattgatgcctgtgatgaggcaatatattctgcaatacgaaaa
attcacgagcaccggaagagacgggcgtttttccttggctttagtcaatctcctgtggaa
tttattaatgccctcattgaatctcaaagcaaagacctaaagctactttctggagaagct
agccgtagtgctgaaaaggagcgtcgatctgatttcttcaatcagccatgggtggaagat
gctgttattcggtacttgaatcgcaaaccagcaactggaagtgatgctcatccaagtact
taa
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