Eucalyptus grandis (rose gum): 104422807
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Entry
104422807 CDS
T03547
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104422807
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egr01009
]
104422807
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104422807
Protein phosphatases and associated proteins [BR:
egr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104422807
Spliceosome [BR:
egr03041
]
Common components
Common spliceosomal components
SR proteins
104422807
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
104422807
NCBI-ProteinID:
XP_010033540
UniProt:
A0ACC3J8D1
LinkDB
All DBs
Position
10:31568925..31571974
Genome browser
AA seq
236 aa
AA seq
DB search
MADSPRKKYSRSPSPWREQSRSRSRSRSRSPTWYKHRPRSRSRSHGRSRSRSHGRSVDEN
NPGNALYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFITMETVEDANR
CVKYLNQSVLEGRYITVEKSRRKRPRTPTPGQYLGLKSTRDHGYRGDRGGDRGGDRGGDR
GRFRGGDRGRDDYGYRRSPRRSPYRGGRDYSPPRRSPYGGRSRRERSPIYSPRGSR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctcctcgcaagaagtattcaagatccccctcaccttggagagagcaatca
aggtctaggtcgagatccaggtctaggtccccaacctggtacaagcaccggccaaggtca
cggtccagaagccatggcagatcaagatccagaagtcatggcagatcagtggatgagaac
aatcctggaaacgcactttacgtgaccggtttatccactagggtcactgaaagggaccta
gaagaccacttttcaaaagaggggaaggttgcttcgtgctttctcgtggtggagcctcgc
acacgcatctcccgtggttttgcatttattaccatggagactgttgaggatgctaaccgc
tgtgtcaagtatctgaatcagtctgttttagaaggaaggtacatcactgttgagaagtca
cggaggaagcgacctcggactccaactcctgggcaatatcttggattgaagagcactagg
gaccacggctatcgtggcgaccgtggtggggaccgcggtggggaccgcggtggtgaccgc
ggtaggtttcgtggtggtgaccgcggccgggatgactatgggtaccgtagatccccaagg
cgctcaccatatcgaggtggtcgtgattattctcctcccaggcgctcaccttatggtgga
aggtcaaggagggagaggtcacctatctattctcctcgtggttctaggtga
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integrated database retrieval system
