KEGG   Eucalyptus grandis (rose gum): 104422972
Entry
104422972         CDS       T03547                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104422972
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104422972
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104422972
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104422972
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 104422972
NCBI-ProteinID: XP_010033722
UniProt: A0A059AIP1
LinkDB
Position
10:complement(34270581..34274136)
AA seq 128 aa
MSWASPEDTYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDL
YCDIPLGLYVIRGENVVLIGELDVEKEELPPHMRRVSTAEIRRAQKAEREASDLKGTMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaagccctgaagacacttacctgtccacttccctcgccagctatcttgac
aagaagcttcttgtactgctgcgagatggtcgaaagctgttgggtatacttcgctcattc
gatcaatttgcaaatgctgttctagagagtgcatgtgaaagagctattgttggcgaccta
tactgtgacatccctttaggtctttatgtaatacgtggggagaatgtagttttgatcggt
gaactggatgttgaaaaagaggagcttcccccacatatgagacgggtttcaacagctgaa
attagaagggcgcagaaggcagaaagggaggcttcagaccttaaaggcaccatgaggaaa
aggatggagttcttggatctggattaa

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