Eucalyptus grandis (rose gum): 104423071
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Entry
104423071 CDS
T03547
Name
(RefSeq) nuclear poly(A) polymerase 4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104423071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104423071
Enzymes [BR:
egr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104423071
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104423071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
104423071
NCBI-ProteinID:
XP_010033831
LinkDB
All DBs
Position
2:complement(34111617..34118291)
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AA seq
748 aa
AA seq
DB search
MVSSEGLGASPPPAMATTATAAKQFGVTKPISVLGPTEVDVQRSMELEKFLVDAGLYESE
EEALKRQMVLDRIGQIVKDWVKQLTRLRGYSDQMVEDANAVIFTFGSYRLGVHGPGADID
TLCVGPSYVNREEDFFFILHDILAQMEEVTELQPVPNAHVPVMKFKFDGISIDLLYASIS
LLVVPDDFDISQVSVLYDVDEPTVRSLNGCRVADQILKLVPNAENFRTTLRCLKLWAKRR
GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWHWPNPVMLCPIEEDE
LGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICEEIELN
KAQWNALFEPYMFFESYKNYLQVDVIADDADDLRSWKGWVESRLRQLTLMIERDTYGKLQ
CHPYPHEYVDTSKQCAHTAFFMGLQRKQGEKVQEGQQFDIRGTVDEFRHSVNMYMFWKPG
MEIYVSHVRRRQIPSYVFPDGYKRARSRISTQHQGEKASSEDADVCKGESAERDLKKKKS
LVGENVNQSGLKKRRSLSPYTCGSVSPEIVTDKPRNLSQENSILGLVGKGETSELNMTSQ
VGKSCDFQSINFSANTGSINQELKVAEVDERSKLENAEGGCASNFSAVRVLASEVGSCEG
MRLDSTFGSSEGNNGSAEVSIDGSTNLGSSRSDSCEADSNSPLEVGCPEFAGGLREELEP
NAVVGLALQPRGGMDPEVQKPVISSMAG
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggtgagctcggagggtttgggggcatcgccgccgccggcgatggcgacgacggcgacg
gccgcgaagcaattcggggtcacgaaaccgatatcggtgttggggcccaccgaggtcgat
gttcagagaagcatggagttggagaagtttttggtcgatgctgggctctatgagagcgaa
gaggaggctctgaagagacagatggttctcgatcggattgggcagattgtaaaagattgg
gtgaagcaactaactcgtctacgcgggtactcggatcaaatggtggaggatgcaaatgct
gttatttttacttttggttcttataggcttggggtacatggccctggtgctgacatagac
actttgtgtgttgggccatcctatgtgaatcgagaggaggatttcttcttcatattgcat
gacatcctggcacagatggaagaagtgacggaattacagccagttcccaatgctcatgtg
cctgtaatgaaatttaagtttgatgggatatcaatcgaccttctttatgcaagcatttcg
ctactggttgtgccagatgattttgacatctcccaagtatctgttctgtatgatgttgat
gaacctactgttcgaagtctcaatgggtgcagggttgcagatcaaattctgaagcttgtt
ccgaatgctgagaattttcggactacactccgctgtctaaagctttgggctaaaaggcgt
ggcgtctattccaatgtgactggatttcttggtggtgtcaactgggcattgcttgtagct
cgtgtgtgccagctttatcctaatgcggtccccagtatgctagtttcacggttcttcaga
gtttatacacagtggcattggccaaacccagttatgttatgcccaattgaagaggatgaa
cttggcttttctgtttgggatccacgtaaaaatcctcgtgacaggacccatcatatgcct
atcataacacctgcatatccttgtatgaattctagttataatgtctcaaccagtactctg
cgtgttatgatggaacagttccaatttggcaacaagatatgtgaggagatagaattgaac
aaggcccagtggaacgcactatttgagccttatatgttcttcgaaagctataaaaattat
ttgcaggtcgacgtaattgctgacgatgcagatgacttgcgttcttggaaaggctgggtg
gaatcgaggcttaggcagttgactttgatgattgaacgggacacatatgggaagttgcaa
tgccatccataccctcacgagtatgttgatacatcaaagcaatgtgcacatacggctttt
ttcatgggtttgcagaggaaacagggggagaaagttcaggaaggtcagcagtttgacata
cgtgggacggttgatgaatttaggcactccgtaaatatgtatatgttctggaaaccgggg
atggagatatatgtgtctcatgttcgcagaagacagattccttcttatgtgtttcctgat
ggatataagcgagctcgatctagaatttcaacccagcatcaaggtgaaaaagcttcctca
gaagatgctgatgtgtgcaagggtgaatcagctgagagagaccttaaaaagaagaaaagc
cttgtaggggagaatgtgaatcaaagtggtttgaagaaacgcagatctctcagtccatac
acatgtggttcagtatcacctgaaattgttactgacaaaccccgcaacctgtctcaggag
aattctatattaggtttagtgggaaagggagagacttctgagttgaacatgacatcgcag
gttggcaaaagttgcgactttcagtctattaactttagtgctaatactgggtccatcaac
caagagctgaaagtagctgaggttgatgaacggtcaaagttagaaaatgccgaaggtggc
tgtgcttctaatttcagtgctgttagagtgcttgccagtgaggtgggttcatgtgaggga
atgcggcttgactctaccttcggaagcagtgaggggaataatgggagtgctgaggttagc
attgatggtagtaccaatctggggtcttctcggagtgattcatgtgaggcagattcgaac
tcacctttggaggttggatgtcctgagttcgcaggaggcttgcgagaagaattggagcca
aatgcggtggttgggctggcacttcagccgaggggcggcatggacccagaggtgcaaaag
ccagtgataagctcgatggcaggttga
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