Eucalyptus grandis (rose gum): 104423477
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Entry
104423477 CDS
T03547
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104423477
03036 Chromosome and associated proteins [BR:
egr03036
]
104423477
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104423477
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104423477
SLIK complex
104423477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
OAM_alpha
Motif
Other DBs
NCBI-GeneID:
104423477
NCBI-ProteinID:
XP_039159727
LinkDB
All DBs
Position
10:complement(7589949..7612276)
Genome browser
AA seq
1751 aa
AA seq
DB search
MAFFKNFPNETVSRGIVEENSRAQSSVANDDVDRSFSERFDMNLDARYPSDGEPSGSSRV
QKEAAADNGSRANNLQPSVRRTANVGKWGSTFWKDCQPMCPPEGSDSGQDSKSGSDCKTS
GRSAGNSADARESDDDGHKEVTKGQRGPSDVPADEMLSDEYYEQDGEEQGESVAFGAFNH
STRMNSIPSTKPTPFPANRNVSRNPRALNDDDEEDDDEKNDDADYEGEDDEDGDDPDDAD
FEPDSGVAGRQLAKKDEDWDAEDSDEDNVSDDDVDVVDEDDSFYSKKMKSKKGGKGGRSG
KSSTERKSLPAPRRPRKGKSPLEEDESSARDSDSESAEDFKGVTRRGGQLRKNNVRSNSL
TSSIRENNEVRTSTRSVRKVSYVESDDSEDVDEGKRKKSQKEEMEEEDGDSIEKVLWHQP
KGTAEAASRNNRSTEPTLMSHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSLPDLQNLSGY
KKVLNYTKKVTEDVRYRRSISREEIEVNDVSREMDLDLIKQYSQVERVISDRLSKDSTGD
VVPEYLVKWQGLSYAEATWEKDNDIGFAQDAIDEYKAREAAMADQGKSVDFQRRKSKASL
RKLDEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNA
QQVYGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVCQQYEFNNDKKGGRTM
KFNALLTTYEVVLKDKAVLSKIKWSYLMVDEAHRLKNSEAQLYTTLLEFSTKNKLLITGT
PLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNENELANLHMELRPHILRRVIKD
VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNH
PFLFESADHGYGGDFRISDNSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRML
DILADYMSLRGFQYQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATAD
TVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKRKMVLDHLVI
QKLNAEGRLEKKETKKGSYFDKNELSAILRFGAEELFKEEKNDEESKKGLLSMDIDEILD
RAEKVEEKEAVEEGHELLGAFKVANFCSAEDDSSFWSRWIKPEAIAQAEEALLPRAARNI
KSYAEVNHSDQPERTNKRRKKESEPQEKVLKRRKADYSVPPATAIEGAAVQVRGWSYGNL
SKRDALRFSRAMMKFGNENQIALIASEVGGSFSAAPSEAQIELFNSLIDGCREAVNMGNI
DPKGPLLDFFGVSVKANDLLTRVQALQLLAKRINHYTDPIRQFRVLTYLKPSNWSKGCGW
NQIDDARLLLGIYYHGFGNWEKIRLDGSLGLTKKIAPVELQHHETFLPRAPNLRDRATAL
LEMELDAAGGKNSNVKGGRKASKNVKDNVLNTAQTRENRAAAPVKVKLQAKKERPQKLAK
AEPLAKEEGEMSDDEEVYEQFKEAKWMEWCEDVMADEIKTLNRLHRLQTTSANLPKEKVL
ARIRNYLQLIGRRIDGIVYEYEEETYKQDRMTTRLWNYVSTFSNLSGERLHQIYSKLRQE
QDEEVGPSHVNGSSSGSMGRDGDSGYFPPFPNQRGYRNATSYHMSEPANKVHDPVKLEAW
KRRRRPEAEAYSSAQPPMQQQMTNGSRLVDPNSLGILGAAPSDSRRFANERPYRMRQSSF
PQRPDFSSDIK
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggccttcttcaagaattttccaaatgaaacagtatcacgtggcatcgtggaggaaaat
agccgggctcagagttccgtagcgaatgacgatgttgataggtctttcagcgagagattt
gatatgaatctggatgcacggtaccccagtgacggtgaaccatctggttccagcagagtg
cagaaagaagcagcagcagataatggaagtagagcaaacaacctgcagccttctgtaagg
agaacggctaatgtgggcaagtggggttccacattttggaaggactgccaacccatgtgt
cctccagaagggtctgattctggacaagattcgaaaagtgggtcagactgtaaaacttct
ggaaggtcagcaggtaattcagctgatgcaagagagtcagatgacgatgggcataaagaa
gtaaccaagggtcaaagaggcccctctgatgttccagcagatgagatgttgtctgatgag
tattacgagcaggatggggaagagcagggtgagtcagttgcttttggagcgttcaatcat
tccacaaggatgaattcgataccctcaacaaaaccaacgccctttccagctaatagaaat
gtctctcggaatccaagggccctgaatgatgacgatgaagaagatgatgatgaaaagaat
gacgatgctgactatgagggagaagacgatgaagatggagatgaccctgatgatgctgat
tttgagcctgattctggggttgcaggtcgtcaattagcaaaaaaggacgaggactgggat
gctgaagactctgatgaggataatgtatctgatgatgatgtggatgttgtggatgaagat
gactcgttttattcaaagaaaatgaagagtaaaaaaggaggtaaaggtggacgcagtggc
aaatcttccacagaacggaagtcactccctgcaccaaggcgaccaagaaaaggtaaaagt
ccgttggaggaagatgagtcttctgccagggattctgatagtgagagtgcagaagatttc
aagggtgttacaaggaggggtggacagcttaggaaaaataacgtcaggtcaaattcttta
acaagcagcataagagaaaacaatgaggtccgtacctcaactaggtcagtaaggaaggta
tcatatgttgaaagtgatgatagtgaagatgttgatgaaggaaagaggaaaaaatcacaa
aaggaggagatggaagaggaagatggtgactcaattgaaaaggttctctggcatcagcca
aagggcacagctgaagcggctagtaggaataacagatcaacagagcctactctcatgagc
catctgtttgattctgagccagattggaatgaaatggaatttttgataaagtggaaagga
cagtctcacttacactgtcagtggaagtcccttcctgatctacaaaatctcagtggatat
aagaaggtgttgaattatactaaaaaagtgacggaggatgtgaggtataggagatcaatc
tctagggaggagattgaagtcaatgatgtgagcagggaaatggacttagatctcatcaag
caatatagtcaggtggaaagagtaatttctgacagacttagtaaagatagcactggagat
gttgtccctgagtatctagtcaaatggcaagggctatcttatgctgaagcaacctgggaa
aaggacaacgatattgggtttgctcaagatgctattgatgagtacaaggcacgggaggct
gctatggctgatcaaggcaagtcggtggacttccagcgcagaaagagcaaagcaagttta
cgaaagcttgacgaacaaccagagtggttgaagggaggaaagcttcgtgactatcagttg
gaaggtttaaatttccttgttaacagttggaggaatgacacgaatgttattttagctgat
gaaatgggtcttggtaagactgttcagtcagtttccatgcttggttttctgcagaatgca
cagcaagtctatgggccatttcttgttgttgtacctctgtctactctgtcgaactgggcg
aaagaattcagaaagtggcttcctgatatgaatgtcattgtttatgttggtactcgtgct
agccgagaggtctgccagcagtatgagttcaataatgataagaagggtggtcgaaccatg
aagttcaatgccttattgaccacatatgaagttgtcctaaaggataaagctgttctatca
aagatcaaatggagttatcttatggttgatgaagcgcatagattgaagaatagtgaggca
cagttgtacaccacccttttggaatttagcacaaaaaacaagttgcttattacgggtacc
cccttacagaacagcgtggaggagctctgggctctgctccactttcttgatcctgataaa
ttcaagagtaaagatgattttgtccaaaactacaagaacctcagctcgtttaacgaaaat
gagctggccaatcttcatatggaactaagacctcacattctacggagagttatcaaggat
gtagagaagagtttgcctccaaagatcgagcgtattcttagggttgaaatgtccccttta
cagaaacagtactacaagtggatattagaaagaaatttccatgacttgaacaaaggagtt
cgtgggaatcaggtctctcttttaaacattgttgtggagctgaagaaatgctgcaaccac
cctttcctgtttgaaagtgcagaccatggttatggaggggattttagaattagtgacaac
agtaaattggaaaggatcattttgagtagtgggaagctggttattcttgacaagttgctt
gtcagattgcatgagacaaaacatcgagttctgatcttctcccagatggtcagaatgttg
gatatactggcggattacatgtcgcttagggggttccaataccagcggcttgatggtagt
acaaaggccgagttgcgccagcaggctatggatcattttaatgctcctgggagtgatgat
ttctgttttctcctatcaactcgggcaggtggccttgggattaatcttgctacagcagat
actgttattatatttgattctgactggaatccacaaaatgacttgcaggcaatgagtaga
gctcatcgaattgggcaacaagaggttgtcaatatttatagatttgttacaagcaaaagt
gtcgaggaagacatcttggagcgtgccaagagaaagatggttcttgaccatctggtaatc
caaaaactgaatgcggagggtagattggagaagaaagaaacaaaaaaggggagctatttt
gacaaaaacgagttgtctgctatcttgagatttggggcagaggaacttttcaaggaggaa
aaaaatgatgaagagagcaagaagggactactaagcatggatattgacgaaattcttgat
agagctgaaaaagtggaagagaaggaagctgtggaggaggggcatgaattgttgggtgct
ttcaaggtcgctaatttctgtagtgctgaagatgacagtagtttttggagtcgatggatc
aaaccagaagctatagctcaagccgaagaagctttacttcctcgtgctgcgaggaacatc
aagagctatgcagaggttaatcactcagaccaacctgagagaaccaataaaaggaggaaa
aaggaatctgaaccacaagagaaggtccttaaacgccgcaaagctgattattctgtgccc
cctgctacagccatcgaaggtgcagctgttcaagtaagaggatggtcttatggcaatctg
tctaagagagatgcattgcgcttttctcgtgcgatgatgaaatttgggaatgagaatcaa
attgctcttattgcttcggaggttggaggatcattttctgcagctccttctgaagcgcag
attgagcttttcaactctttgattgatggatgtcgagaggcagtcaatatgggaaacatt
gatccgaaggggccacttctagatttttttggtgtctctgtgaaagctaatgatcttctt
actcgagttcaagcactccagcttctagcaaagcgcatcaaccactacactgatccaatc
aggcagttcagggtgttgacttatctcaaaccttcgaattggtccaaaggctgtggatgg
aatcagattgacgatgcaagattactgcttggcatctattatcatggatttggcaattgg
gagaagatacggttagatggaagtcttggccttacaaagaagattgctccagtcgaactt
cagcaccatgagacatttctaccacgtgctccaaatttgcgagaccgtgcaactgctctt
ctagaaatggaacttgatgctgctggaggcaagaattctaatgtcaaaggaggacgtaaa
gcctctaagaatgtcaaagataatgttctcaacaccgctcaaacaagggagaacagagct
gctgctcctgtgaaagttaagttgcaagcaaaaaaagaaaggcctcagaaattggcgaaa
gctgaaccattagctaaagaggaaggtgaaatgtcagatgatgaagaagtgtatgagcag
tttaaggaagcgaaatggatggagtggtgtgaagatgtcatggcggatgagataaaaacg
ttgaatcgtcttcatagattacagactaccagtgccaatcttcccaaggaaaaggtgctt
gcaaggattcgaaattatctccagctcattggaagaaggattgatggaatcgtttatgaa
tacgaggaggagacttacaagcaagacaggatgaccacgcgactatggaactatgtgtct
accttctcaaacttatctggggagagactccatcagatttactcaaaacttagacaggag
caggatgaggaggttgggccatctcatgttaatggttcttcatccggctcaatgggcaga
gatggtgattctggctatttccctcctttccccaaccaaagaggctacaggaatgcgacc
tcttaccatatgtctgagccagcaaacaaagtccatgatccagttaaattagaagcctgg
aaacggaggaggagacccgaagcagaggcatattcttctgctcagcctccaatgcaacag
caaatgaccaatggttcccgtttagttgacccgaattcgctgggcattcttggagcagca
ccatctgatagtagacgatttgctaacgagagaccatacagaatgcgtcagtccagcttt
ccccagagaccagatttttcttcggatatcaaataa
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integrated database retrieval system
