Eucalyptus grandis (rose gum): 104423533
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Entry
104423533 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104423533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104423533
Membrane trafficking [BR:
egr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104423533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
EIF3I
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
104423533
NCBI-ProteinID:
XP_039158742
LinkDB
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Position
10:11662650..11665753
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AA seq
419 aa
AA seq
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MEEIEHAEDGIEREAVREDFARNIGGSSERRRFDKELRKMKTCFASTVMKAVKSGQGKAT
CGSWIQRRPGKGNLVALGKPGNDGPSSPSLIQIFPFDPRTTSLPSLPLADHVLDASEGHP
LTIAVHPSGDDVVFSTSSGGCKILELYGRESNLQLIARKPPLLQDIGPQQCIAFSGDGSR
LTAGGLDGRLRIFKWPSFQVVLDEPAERSSYRDLDFSLDSEFLASTSTDGSARIWRAEDG
VPLATLARGLDERIEXCRFSRDGARPFLFCTVQKGDKASTGVWNISSWDRIGHKRLLGKP
VSAMSVSLDGRYLALQDGDFCVAELKKMEICHWSKRLHSGTNISMLEFCPTERVLLSTSS
ECGALVTKLNVPADWKDWQLYGMLLGLFLASAAACYIFYKNSDSFWTYPLGSDRPAEPV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattgagcatgcagaggacgggatagaaagagaagcagttagggaggatttt
gcgaggaacatcggtggttcaagtgaaaggcggagattcgacaaagagctgaggaagatg
aagacatgttttgcttccacagtaatgaaggcagtcaagtcgggtcagggaaaggcgaca
tgtgggtcatggatccagcgccgacccgggaaaggaaacttggtagcgctgggcaagccc
gggaacgacggcccttcttcgccatctttgatccagatttttccttttgatcccaggaca
acttctctaccctctctccctctggctgatcatgtgcttgatgcaagcgaaggccatccc
ttgacaatcgcagtgcacccgagcggcgatgatgtcgtgttctccacgagttctggcgga
tgcaaaatcttggagctgtatggtcgagaatcgaatctccagctgatagccaggaagcca
ccacttcttcaagacattggtcctcagcagtgtattgccttcagtggcgacggttccagg
ctcacggctggtggattggatggtcgtctcaggatcttcaagtggccgagcttccaagtc
gtgctggatgaaccggctgagcgcagctcctatcgggatctcgatttcagcctagactca
gaattcctggcctcaacctcgactgatggttcggctagaatatggagggccgaagatggc
gttcccttggctaccttggctcgtggtctggatgaaagaatcgagncttgtcggttttct
agggatggggcgagaccgttcttgttctgcacggttcagaaaggcgataaggcctcgaca
ggagtttggaacataagctcatgggacagaatcggccacaagaggttgctcgggaagcca
gtatcagctatgtccgtcagtctggacggaagatatctcgcgctgcaggatggcgatttc
tgcgtggctgagctgaagaagatggagatatgccattggagtaagaggctgcactcgggc
accaacatctcgatgctggaattttgtccgactgagcgggtcttgttgagtacttccagc
gaatgcggagcattggtgacgaagcttaacgtaccggccgattggaaagattggcaactc
tatggaatgcttctaggattgttcctggcgtctgcggctgcatgctacatattctataag
aactccgattcattttggacttaccctctcgggagtgatcgacctgccgagccggtgtga
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