Eucalyptus grandis (rose gum): 104424322
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Entry
104424322 CDS
T03547
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104424322
03036 Chromosome and associated proteins [BR:
egr03036
]
104424322
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104424322
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
Pre-60S particles
Helicases
104424322
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104424322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
104424322
NCBI-ProteinID:
XP_010034995
UniProt:
A0A058ZWT8
LinkDB
All DBs
Position
11:complement(524911..530827)
Genome browser
AA seq
704 aa
AA seq
DB search
MPSIVVSDSVQSPDNSKSKSKEKKMKVKVQLEADGGFESPASDKKHKKEKKSGGKSSESK
QPKVLEHQEDAKKEKKRKALELREDDDDDKSETSSELVDPENLKGKKKKAKLSDGDDEVA
QEENPNAVSNFRISDSLRLKLKDNKIEALFPIQAMTFDIVLDGTDLVGRARTGQGKTLAF
VLPLLESLTNGPAKTSRKTGYGRPPSVLVLLPTRELAKQVFSDFEVYGGAVGLTSCCLYG
GAPYHAQESHLRRGVDIVIGTPGRVKDHIERGNIDLSSLTFRVLDEADEMLRMGFVEDVE
LILGKVKDTSKVQTLLFSATLPDWVKGISSRFLKQNKRTIDLVGNEKMKASTNVRHIVIP
CTSAARPQLIPDIIRCYSSGGRTIIFTETKECASQLSGLLPGARPLHGDIQQSQREVTLA
GFRSGKFMILVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY
DPRRANVSKIERESGVKFEHIAAPQPSDVAQAAGVEAAESITQISDSVIPAFKSAAEQLL
NTSGMSAVELLAKALAKASGYSEIKSRSLLSSLENHVTLLLEAGRPIYTPSFAFGVLRRF
LPEDKVESVKGLTLTADGNGVVFDVAAEDLDTFLAGQENAANVSLEVVKTLPRLQEREQS
RGGRFGGGGGRGGYGGRGGGGFSGQRNGRFSGGFGGRGRGNYRR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatagttgtctccgattcagttcagtcccccgacaactccaaaagcaaaagc
aaagagaagaagatgaaggtgaaggtccagctcgaggccgacggcggcttcgagtctccg
gcgtcggacaagaagcacaagaaggaaaagaagagcggcggcaagagctccgaatccaag
cagccgaaggtcctggagcatcaggaggatgcgaagaaggagaagaagaggaaggcgttg
gagctgcgcgaggacgatgatgacgataagagcgagaccagctccgagctggtcgacccc
gagaacttgaaggggaagaagaagaaggcaaagctgagcgacggcgacgatgaggtggct
caggaggagaaccccaacgccgtgtcgaatttcaggatctcggacagcctgaggttgaag
ctgaaggacaataagatcgaggctttgttccccattcaggccatgacgtttgatatcgtc
ctcgatgggactgatttggtcggccgtgcccgcactggtcagggcaaaactctagctttt
gtcttgccccttttggaatctctgacgaatgggcctgcaaaaacctcaaggaagacagga
tatggtaggccaccaagtgttttggtgcttctacctactagggaattggccaagcaggtg
ttctctgattttgaagtatatggtggagcagtgggcttaacatcatgttgtttgtatggt
ggagcaccctatcatgctcaggagagccatctgaggagaggggttgatatagtaattgga
acacctggccgtgtgaaagaccacattgagaggggaaatattgacttgagctctttaacc
ttccgtgtccttgatgaggctgatgaaatgctaaggatgggttttgttgaagatgtggag
ctaattcttggcaaggtgaaggatacaagtaaagttcagacgctgctctttagcgcaacc
ttaccagactgggtgaagggtatttcttccaggttccttaaacagaacaagagaactata
gatctagtaggtaatgagaaaatgaaggccagcaccaatgttaggcatattgtcattcct
tgtacaagtgcagctagacctcagcttatcccagacataatacgctgttacagcagtgga
ggccgtaccataatttttaccgagacaaaggaatgtgcttctcaactttcgggattgttg
cctggagcacggcccttgcatggagacatacagcaatcccagcgagaggttacacttgct
ggtttcaggtctggcaagtttatgatattagtggccacgaatgtggcggcacgaggattg
gacatcaatgatgtccagttaattatccagtgcgagcctccacgtgatgttgaagcatat
attcacagatctggacgcacagggagagctggcaatactggagtagctgtcatgctgtac
gatccaagaagggcaaatgtatctaagattgaaagagagtctggtgtaaaatttgaacac
atcgctgctccgcagccaagtgatgttgctcaagctgctggtgttgaagctgcagaatca
ataacacaaatttctgatagtgttattccggcattcaaatctgcagccgagcaactactg
aacacatcaggcatgtcagcagttgaattacttgcaaaggctcttgctaaggcttctggt
tatagtgaaataaagagcagatcactgctttcgtcacttgaaaaccatgtaaccttactt
cttgaggctggaaggcccatttatacaccttcgtttgctttcggtgtcttgaggagattc
ttgcctgaagacaaagtagagtctgtgaagggtcttactctcacagctgatggaaatggc
gttgtatttgatgtggcagctgaagatctagatactttccttgctggtcaggagaatgca
gcgaatgtaagcttagaggtggtaaaaacattgccgcgtctccaggagagagagcaatca
agagggggaagatttggcggcgggggtggtcgtggtggctatggtggtaggggtggtggt
ggtttttctggccaaaggaatggtcggttttctggtggctttggcgggagaggccgtggc
aattatagaaggtga
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