Eucalyptus grandis (rose gum): 104424344
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Entry
104424344 CDS
T03547
Name
(RefSeq) E3 ubiquitin protein ligase RIN2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104424344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104424344
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
104424344
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104424344
Multi subunit type E3
ERAD complex
104424344
LMBR1L-GP78-UBAC2 complex
104424344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
CUE
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_2
zf-RING_11
zf-C3HC4_4
zf-RING_Vps41
zf-RING_5
zf-RING_16
Endonuclease_7
E3_UbLigase_EDD
PHD
zf-HC5HC2H
RINGv
Motif
Other DBs
NCBI-GeneID:
104424344
NCBI-ProteinID:
XP_010035025
UniProt:
A0A058ZY41
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All DBs
Position
11:complement(693256..701385)
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AA seq
588 aa
AA seq
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MGVQYLSISGVCTVLSFLGLQWWAQNLIEKFKLDGLIGESIVKSDNANHVLDLLLSSSTT
VALLATFILSAFTLLVLSLKSIFFSELSSSETRKLLERLGNYLIYKGTFLPLVLPPTLFH
FCLWSTWLTVLCSLKMFQALARDRLERLNASPSTTPWAYFRVYSVLLVVLTVDVFWIRLS
LMIHKTLGSSMFLLLLFELFCVIFETLQAIVVHGFQLLDIWVNHSAGNSSGCRMFKFIDT
SAAGALWEWKSFLIRNLGFVLDMATLLTAVGHYVLIWLLRGMPLHIVDVVLFLNIRALLS
AIIKRVKGFIKLRTALATLHAALPDATSEELQAYDDECAICREPMAKAKRLHCRHLFHLG
CLRSWLDQGLNDAYSCPTCRKPLFVSISENEASPSSEVLSDEQLARQLSVGLDGQNSSEN
VLPPGLFPSQTQNPMDEGTWRNAGLNSGWLNSWPSHGVDGAGPSSTAMRSVGLGRVQMMM
RHLASIGDTYSQSALDDAGWGIWPTNLSHAGPSGSLASGAPTVGRHPGATGGLHLRTTLR
SANDDIANILTMAETVREVLPHIPEEMIFQDLQRTNSVTVTVNNLLQI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccaatacttatccatctccggtgtctgcacggtcctgagctttttgggcctt
caatggtgggcacagaatttaatagagaaatttaaattggatgggctgattggagagagc
atcgtcaaatcagataatgccaatcacgtgcttgatctcttattgagttcttccaccact
gttgccctgctggcaacttttattctcagtgccttcactctacttgttttgtccttgaag
tctatattcttctcagagctgtcatcctctgaaactcgaaaactgttggaacgattggga
aactaccttatttacaagggaacatttctacctttagtacttcctccaacattgtttcat
ttttgcctatggtcaacctggttgactgttctatgttctctaaagatgtttcaagctttg
gctagagatcgcctggaaagattgaatgcttctccttctacaacaccgtgggcatatttt
cgtgtatattcagtgttattggtggttctgactgttgatgtgttctggattagactttct
ctaatgattcacaaaacattggggtcttcgatgttcttgttgctactttttgagctcttc
tgtgttatttttgaaacacttcaggccattgtggttcatggattccagcttcttgacatc
tgggtaaatcattcggcaggaaacagcagtggttgccgaatgtttaagtttatagataca
tctgcggcaggtgcattatgggaatggaagagctttctgattagaaatcttggttttgtc
cttgacatggcaactttattgactgctgtggggcattatgtgcttatctggttgcttcgt
ggcatgccactacatatagtggatgtggttctattcttaaatatacgtgccttactaagt
gcgatcatcaaacgtgtgaaggggtttattaaactgagaactgcattggctactcttcat
gctgcccttcctgatgcaacatctgaagagctccaagcatacgatgatgaatgtgccatc
tgcagggaacccatggccaaggccaaaaggctccactgccggcacctctttcatcttggt
tgcttgagatcttggttggatcaaggtcttaatgacgcttattcgtgccccacttgtcga
aagccgctttttgtttccatatctgagaatgaagcaagccctagcagtgaagttttgagt
gatgaacagcttgctcgccagttaagtgtaggtcttgatggacaaaattcttctgagaat
gtgctgccaccaggactatttcccagtcagactcagaatcctatggatgaaggaacttgg
agaaatgccggactgaactcaggttggctgaattcttggccaagccatggtgttgatggt
gctggcccctcctccactgccatgagatcagttggactggggagggttcagatgatgatg
aggcatcttgcttccattggagatacatacagccagtctgctcttgacgatgctggctgg
ggtatttggcctactaatctctctcatgctggtccctctggttcacttgcttctggtgct
cctactgttggaagacatcctggagccactggtggtctacatttgagaactaccttgcgt
tctgcaaatgatgacattgcaaatatactaacaatggctgaaacagttcgagaggtttta
ccacatattccagaagagatgatttttcaggatttgcagcgaacaaattctgtgactgta
actgtgaataatcttctccagatctaa
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