Eucalyptus grandis (rose gum): 104424408
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Entry
104424408 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egr03400
]
104424408
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104424408
BRITE hierarchy
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GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
104424408
NCBI-ProteinID:
XP_010035121
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Position
11:1677331..1682752
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AA seq
596 aa
AA seq
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MGVKHLWDILESCKKTIPLHHLQNKRVCIDLSCWMVQLQSVSRTHXLHEEKVYLKGLFHR
LRALLALNCSLIFVTDGSIPAIKLSTYRRRLNSGIEVDRDETNPQNLASLKRNMGSEFSR
MIKEAKVLGNALGIPCLDGMEEAEAQCALLNSESLCDGCFTSDSDVFLFGAKTVYRDICL
GDGGYVICYEMADIERQLGFGRNSLIALALLLGSDYSHGVRGFGPESACQIVKSAGDDGV
LQKIAYGGLPILKKTKGSKKQQKLHEPNNKENSSPNEFDVNGSEGNSQGNEQFLQVIDAY
IRPKCHSADSEAVHRVLANHPFRRFKFQEVCAQMFEWPPEKTDEYILPKIAERDLRRFAK
LRLASSELGVELPLYEIPVKCPVSEIIKQRKVLGVDCFEVSWEHLDGLETSIVPADLLES
ACPEKILEFKERIALRKKQKCHKPRHRKLKSESSLAELDLKLQQLLLEINSESGRNPKTN
PLSSRAVTPENGRVGIEVDLLDDGSLVDQVLDIERGCNASMPSSSADSRVVEKEVIDLLS
PSPAIRHPAIARCKHFDYQHIDVIDLSESDAEVSPEHERKARELRQFIINVRDDTP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaagcacctgtgggacatcctggaatcgtgcaagaagaccatccctctccac
cacctccagaacaagagggtgtgcatcgatctctcgtgctggatggttcagctgcagagc
gtgagcaggacccacnaattgcatgaggagaaggtctatctcaagggcctcttccaccgc
ctccgagctctccttgctctcaactgtagcctcatcttcgtcacagatggatccattcct
gccatcaaactatccacttacaggcgtcgcctaaattcaggaattgaggttgatcgagat
gaaacgaatccacaaaacttagcttcactgaaaagaaacatgggctctgagttctcacgc
atgatcaaagaggcaaaggttttgggtaatgcacttggaatcccctgcttagatgggatg
gaggaagctgaagcccagtgtgcactgttaaactcagaatcactatgtgatggatgcttc
acctccgattcagatgttttcctctttggagcaaagacagtttacagagacatttgcctt
ggtgacggtggttatgttatctgttatgaaatggcagacatagagagacagcttggattt
ggaagaaactcgttgattgctcttgccctgcttctggggagtgactactcccatggagtt
cgtggttttggtccagagtcggcatgtcagatagtaaaatcagctggagatgatggggtc
cttcaaaagattgcatatgggggattgcccattctaaagaagacaaaaggctcgaagaaa
cagcagaagctgcatgagccaaataataaggaaaactcatcgcctaatgagtttgatgtc
aatggtagtgagggtaattctcaaggaaatgaacaatttttgcaagttattgatgcatat
attaggccaaagtgtcactctgcagattctgaagctgtccacagggtccttgcaaatcat
ccttttcgacgtttcaaatttcaagaagtatgtgcccagatgtttgagtggcctcctgag
aaaacagatgagtatatcctaccaaagattgcagagagagatttaaggaggtttgccaaa
ttgcggttggcatcttcagaacttggggttgagcttccgctatatgaaattcctgtcaag
tgtcctgtgtctgaaatcatcaagcagagaaaagttctcggtgtagattgttttgaggta
tcatgggagcacttggacggacttgaaactagcatcgtgcctgctgatcttttggaaagt
gcttgtcctgaaaagatactggagttcaaggagagaatagctctgcggaaaaaacagaag
tgtcataagccaagacacagaaaattgaagagcgagtcatcacttgcagagcttgatctg
aagctccagcaactgttgctcgaaatcaactctgagagtggtagaaatcctaaaactaat
ccactttcttcaagagccgtaactccagaaaatggaagagtcggaattgaagttgatcta
ttggatgatggctcattagtcgatcaagtgctggacattgaacgtggttgtaatgcttcc
atgccctcttcttcagctgattccagggtcgtagaaaaggaggtcatcgatctcttaagc
ccctcgccagcaatccggcatccagctattgctagatgcaagcattttgattatcagcat
attgatgtaatcgatttaagcgagtcagatgctgaggtgtcacctgaacatgagaggaaa
gcgagagaactacgacagttcataatcaatgttagggatgacactccttga
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