KEGG   Eucalyptus grandis (rose gum): 104424675
Entry
104424675         CDS       T03547                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03013  Nucleocytoplasmic transport
egr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104424675
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104424675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104424675
   04131 Membrane trafficking [BR:egr04131]
    104424675
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104424675
Membrane trafficking [BR:egr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    104424675
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    104424675
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    104424675
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_RIG_2nd WDR55 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd RMC1_N
Other DBs
NCBI-GeneID: 104424675
NCBI-ProteinID: XP_018723539
UniProt: A0A059D1A1
LinkDB
Position
2:15913070..15914852
AA seq 301 aa
MPPQKIESGHKDTVHDLAMDYYGKRLATASSDHTINVVGVSSSGSQHLATLIGHQGPVWQ
ISWAHPKFGSLLASCSYDGRVIIWREGNPNEWTQAQVFEEHKSSVNSVAWAPHELGLCLA
CGSSDGNISVFTARQDGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGMMEPVQKLCS
GGCDNTVKVWKLYNRVWKLDCFPVLQMHTDWVRDVAWAPNLGLPKSTIASASQDGRVIIW
TVAKEGDQWQGKVLYDFRTPVWRVSWSLTGNILAVADGNNNVSLWNDAVDGEWIQVSTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctccacagaagattgaaagtggacacaaggacacggtccatgatctggcgatggac
tactatggtaagagactggcgacagcgtcgtcggaccacaccattaacgttgttggagtc
agcagctcgggatctcagcatcttgccacgctgatcggccatcaaggacccgtttggcag
atatcttgggctcatccgaaattcgggtctttgcttgcttcgtgctcgtatgacggacgg
gttatcatatggagagaaggtaatccaaatgagtggacgcaggcacaagtatttgaagag
cacaaatcatcggtcaattccgttgcttgggctcctcatgagctcggcctttgtctggct
tgcggttcatccgatgggaatatttcggtgttcactgctagacaggacggcggttgggat
acttcaaggatcgatcaggctcatccggtcggggtcacctccgtgtcgtgggccccgtcg
actgcccctggtgcacttgttggttctggcatgatggaacctgttcagaagctctgctca
ggtggttgtgataacaccgtgaaggtgtggaagctctacaacagggtctggaagttggac
tgctttccggtgcttcagatgcacactgactgggtgagggacgttgcctgggcacccaac
ttgggccttccgaaatcgactatcgcaagcgcatcgcaggacgggagggtcatcatatgg
accgtggccaaggaaggggatcaatggcaggggaaggttttgtacgattttaggactccg
gtttggagggtctcgtggtccctgaccggtaacattttggcggtggcagacgggaataac
aatgtctccctttggaacgacgccgttgatggtgagtggatccaggtttcaacagtcgag
ccatag

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