Eucalyptus grandis (rose gum): 104425185
Help
Entry
104425185 CDS
T03547
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03018
RNA degradation
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104425185
09123 Folding, sorting and degradation
03018 RNA degradation
104425185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104425185
03041 Spliceosome [BR:
egr03041
]
104425185
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104425185
mRNA degradation factors
5'-3' decay
Lsm complex
104425185
Spliceosome [BR:
egr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104425185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
RimP_C
Motif
Other DBs
NCBI-GeneID:
104425185
NCBI-ProteinID:
XP_010036102
UniProt:
A0ACC3IT34
LinkDB
All DBs
Position
11:complement(18079828..18083923)
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaggaaagagacggttttggatttggccaagttcgtggataagggggttcaa
gtcaagctcaccggtggaagacaagttactggtactttaaagggatatgatcagttactg
aaccttgttctggatgaagctgtggaatttctacgagatcccgatgaccccttgaagacc
acggatcaaaccaggcgtcttggcctaatagtctgccggggcactgctgtgatgcttgtg
tcacctactgacggcacagacgagattgccaatcccttcgtgcagccagatggcgcttaa
DBGET
integrated database retrieval system