Eucalyptus grandis (rose gum): 104425403
Help
Entry
104425403 CDS
T03547
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104425403
04121 Ubiquitin system [BR:
egr04121
]
104425403
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104425403
Membrane trafficking [BR:
egr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104425403
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104425403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
Rad50_zn_hook
zf-Nse
zf-C2H2_2
Prok-RING_1
FAR1_N
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
104425403
NCBI-ProteinID:
XP_039160122
LinkDB
All DBs
Position
11:20714911..20719732
Genome browser
AA seq
306 aa
AA seq
DB search
MSSSRNTHWCYQCRRPIRLRGRDAVCPYCIGGFIQELDLVHINRLDFFGLGDEGRDPHYR
MMQQAFSALVGQRLADRSHSHGIRGRSDLFSERDSGVSPFLIYGGPVRLSASNGIEALFN
VVPGIGLTRGNVGDYFIGPGLEEMVGHLAASANEHQGPAPAARPLIDSMPTIKILQRHLR
SDSHCPVCKEKFELGSDARQMPCSHIYHSDCIVPWLLQHNSCPVCRQELPPQGSSSSRPT
AANRSSSNNGNTSRRESQGRRNPFSFLWPFRSSNSSSQNNRHSPSNSSTVRENNHHQMEY
SEWPFD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtagcagaaacacccattggtgttaccaatgtagacgaccaatacgattacga
ggtcgagatgcagtctgcccctattgtattggaggatttattcaagaacttgacctggtg
cacattaaccgactcgatttctttggacttggtgatgaaggtcgtgacccacactatcgg
atgatgcagcaagcattctcagcattggtagggcagcggttggcagatagaagccatagc
catggcatcaggggcagatctgatctattttctgagcgtgactctggagttagtcctttt
ctgatatatggcggtcccgtgagattgtctgcaagtaatggaattgaggccctttttaat
gtggttcctggaattggattgacaaggggtaacgtgggcgactattttatcgggcctgga
ctagaagaaatggttggacaccttgctgcttctgctaatgaacatcagggccctgctcct
gcggcgaggcctttgatcgattccatgcccactattaagatcttgcagaggcatcttcgc
tccgattcacactgccctgtttgtaaagaaaaatttgagcttggatcagatgcaaggcaa
atgccatgcagccatatttatcattcggattgcattgtcccatggctactccagcacaac
tcatgccctgtttgccgccaagaactgccgccccaaggatcgagcagcagtcgtccaact
gctgcgaatcggagcagcagcaataatggcaacaccagcaggagggagagtcaaggaagg
aggaatcccttctcgttcttgtggccattccgttcatcgaattccagctctcagaacaat
agacacagccctagtaactcctcgactgtgcgtgaaaataaccaccaccagatggagtac
tctgaatggccttttgactga
DBGET
integrated database retrieval system
