Eucalyptus grandis (rose gum): 104425494
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Entry
104425494 CDS
T03547
Name
(RefSeq) DNA polymerase delta small subunit isoform X1
KO
K02328
DNA polymerase delta subunit 2
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03030
DNA replication
egr03410
Base excision repair
egr03420
Nucleotide excision repair
egr03430
Mismatch repair
egr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104425494
03410 Base excision repair
104425494
03420 Nucleotide excision repair
104425494
03430 Mismatch repair
104425494
03440 Homologous recombination
104425494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
104425494
03400 DNA repair and recombination proteins [BR:
egr03400
]
104425494
DNA replication proteins [BR:
egr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
104425494
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
104425494
MMR (mismatch excision repair)
DNA polymerase delta complex
104425494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
104425494
NCBI-ProteinID:
XP_010036487
UniProt:
A0A059A347
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Position
11:23217753..23223749
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AA seq
441 aa
AA seq
DB search
MEIDAPPPLAAALQRKQSAYLSLDETFQIQKETYRGQQYSQIYFARLHMMRTLLYSLVPN
LKPHVPVCTVLGLEGGKECIIVGTLYKHMKLKPTILDEYSKERSAVPLVKLHNFMHPDDH
LVLEDESGRVKLSGSLFSPASYVTGVVVALHGKETDAGDFLVQDVLEAGLPSQLEFPLKS
REDKYVVLVSGLNIGSSTCNPLQFQLLVDHITGHLGDEQEQGIAAEIVHVVIAGNSVEIP
RGILNRQNLASKDLSTLSEPIKELDILLMQIAAGLPLDIMPGPNDPANFSLPQQPLNKCL
FPGSSAYNTFRSCTNPHCFELDNIRFLGTSGQNIDDLDKYSEAKNKLEFMERTLKWRHLA
PTAPNTLGCYPFADRDPFLIESCPHVYFVGNQDKYETQMLKGSEGQLVRLISIPKFCETG
TAVVLNLKNLECHTLTFGTSV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgacgcgccgccgccgctggccgccgccctccagcggaagcagtccgcctac
ctctccctggatgaaacgttccagatacagaaggagacgtaccggggccaacagtacagc
cagatttacttcgctcgtctccacatgatgcggaccctcctctactctctcgttcccaat
ttgaaaccccatgtccccgtttgcactgtactgggattagaaggtggcaaggaatgcatt
attgttggtactttatacaagcacatgaagcttaaacctactatacttgatgaatactcc
aaagagaggtctgctgttccactcgtgaagctccacaacttcatgcaccctgatgatcat
cttgtgctagaagacgagagtggtagagtaaagctcagtgggagtttgttttcacctgct
tcatatgtgacaggtgttgttgttgctttgcatgggaaggaaactgatgctggtgacttt
ttagttcaagatgtccttgaagcaggcctaccatcccagttggagtttcctcttaagtcg
agagaagacaaatatgtcgttcttgtgtctgggcttaacatcgggagcagcacttgtaac
cccctccagtttcagcttcttgttgatcatataaccggacatcttggggatgaacaggag
caaggcattgcagccgaaattgttcatgttgtaattgctggaaattctgttgaaattccg
cgtggaattcttaacagacagaatttggcttctaaggacctatcgacattgtctgaacca
attaaagagcttgatatattgctcatgcagatagctgcagggttgcctttggatatcatg
ccggggccaaatgacccagcaaacttttccttgcctcagcagcctctcaacaaatgcctt
ttccctggttcatcagcctacaacacgtttagatcttgtacaaatcctcattgttttgag
cttgacaatataaggtttcttggtacatcaggtcaaaacattgatgatctcgataagtac
tctgaagcaaaaaataagcttgaatttatggaaagaacattgaaatggagacatcttgca
ccaacagcacctaatactctgggctgctatcctttcgctgatagggatcctttccttatc
gagagttgccctcatgtttactttgttgggaatcaggataaatatgagacacagatgcta
aaaggatcagaagggcagttggtgagactcatttccattcctaaattttgtgagacagga
actgcagttgtgctaaacttaaaaaacctcgagtgccatacactcacttttgggacttca
gtttag
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