KEGG   Eucalyptus grandis (rose gum): 104425499
Entry
104425499         CDS       T03547                                 
Name
(RefSeq) uncharacterized ATP-dependent helicase IRC20
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104425499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egr04121]
    104425499
Enzymes [BR:egr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104425499
Ubiquitin system [BR:egr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104425499
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 RING_XB3-XBAT31 zf-ANAPC11 Baculo_IE-1 Prok-RING_4 zf-RING_6 Sina_RING zf-rbx1
Other DBs
NCBI-GeneID: 104425499
NCBI-ProteinID: XP_010036495
UniProt: A0A059A357
LinkDB
Position
11:24329775..24332369
AA seq 414 aa
MGEETSDTMNLDLNLGPVSDQDVEMTSRISDFETWYEGQIRMVREASRMREARLRGRQRW
RRRATRISPDARNISVDLDQLVIDSGNVTTLHTGEGSVPAEDRLNAEGPKVCENNTSFLV
DTKSEKKDDVAKGSETDGSFFDCNICLDLAREPVVTCCGHLFCWPCLYQWLHIHSDVKEC
PVCKGEVTTKTVTPIYGRGNNTCRPEEDLTLKIPVRPIARRAESFRQVAQRSPLHFPMED
IIRHLGGRFDLTQDLTQPPESSDIRETSRSNSMLNRILTSRGMRREQTVNVPPPDDDVPF
LRDNIHNTDRRESRRLALLLRRSHSHRNAPVPMEAYLRDYNIGRNEEQPPSVDDRDSFSS
IAAVINSESQMDTAVEIDSMVSLSTSSSRRRGDASRTSDVDSGDSRATRRRRLD
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgggagaggagacgtcggataccatgaacctcgatttgaatttggggcctgtttccgat
caggacgtggagatgacctcgcgaatctcggatttcgagacctggtacgaagggcaaatt
cgcatggtgagagaagctagcaggatgagggaggccaggctgaggggtcggcagcggtgg
agacggcgggcaactcggatttcgccggacgctcggaacatttccgtggacctcgaccag
ctggtgattgactcgggtaatgtgacgaccttgcacaccggtgaggggagtgttcctgct
gaggatagattaaatgccgaggggcccaaagtttgtgagaacaacaccagttttcttgta
gacaccaagtcggagaagaaggatgacgtggccaaaggtagtgagactgatgggagcttt
ttcgattgcaatatatgtttggacttggctagagagcctgttgtgacttgttgtggtcac
ttgttttgctggccatgcctttaccagtggttacacattcactcagatgtgaaggaatgt
cctgtttgcaagggagaggtaactactaagaccgtcactccaatatatgggcgtgggaac
aatacttgtaggcctgaggaagatttgactctcaagatccccgtgaggccaattgcacgt
cgtgcagaaagtttcaggcaagttgctcagagatctcctctgcatttccctatggaggac
atcattcggcatctcgggggtagatttgatttgacccaggatttgactcagccacctgag
tctagtgatatccgcgaaacatcaaggagtaattctatgctaaatcgaattttgacttct
cgtggaatgcgtagagaacaaactgtaaatgtgccaccgcctgatgatgatgttcctttt
ctgagggacaacattcacaatactgatcggagagagagccgccgactcgctttattgctt
agacgatcacattctcatagaaatgctccagttcccatggaagcatatttgcgcgattat
aatataggaagaaatgaggagcagcctccttctgttgatgatagagattctttctcaagc
attgctgctgtaataaactcagaaagccaaatggatactgctgttgagattgattcgatg
gtatccctttcgacttcatcttcaagaagaagaggcgatgcttctaggacttctgatgtt
gacagtggggattctcgtgctaccaggaggaggcgactggactga

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