Eucalyptus grandis (rose gum): 104425612
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Entry
104425612 CDS
T03547
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104425612
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
90S particles
Other 90S particles
104425612
Pre-60S particles
Other pre-60S particles
104425612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
Tra1_ring
SAMP
Motif
Other DBs
NCBI-GeneID:
104425612
NCBI-ProteinID:
XP_039160805
LinkDB
All DBs
Position
11:complement(22650839..22665534)
Genome browser
AA seq
1110 aa
AA seq
DB search
MAAIEASAAAMKPQKHRQRKQEERPSLLQQDQQMEHDHADEPLRDGADVCQQLMDRYAKS
SAPQHRHLLATAAAMRAILDAESLPLTPASYFGAAMSAVETTSSLQALDSTEVAALMSFL
VIVLPAVPPQGIAPARAREAAEVLAEVREEEKLAVSSVRSAVKCLGVLLGFCDLEDWDSV
KFGLKTLLKFSLAKRPKVRRCAQECLEKVFKCFKSSSVVRKASKLVLSSFESCISSADWS
RTTSPEDGSTDDKLLKSENIGFLHMLNVLVSVCPYLSAKVSIQILSELDKLMSLGFSALT
TLILKIIEALLETLAVGDTVQEIENVITSLASYVSSKENSVDTVMTAANLLRVALNKFHT
GGSSLWIKNLPVVWESLAGLLVGEADAASQASSILKDLINEQVNEETFHMESQPSDDVSE
ESLETIAIRRICIALESALSAHGETPNQHALSVISLLYLKLGKTSYIYMRSILLKLVHLM
TSAERGPSITGHLQRCIGSAVIAMGPEKMLSVVPISLHPDNFSSSNVWLVPILRDYVVGS
SLEYYMDYIVPLAKSFKRASSGVKKSVLGKELLGHAHDLWKLLPAFCRGSSDTDKQFRRL
AVLLTDFLKKYSFMHESVALALKILVNQNTSVLSSRVVKDLDTCNVQASGLELQTLPIYS
KKTASRNIKALSSCSTELLQLLLDLFVDSIPATRSYLKDPIGCLASITDSSATREIFVSF
LKRFGILNKRDEFERGRDEMDASTDKEPGNEHAIDVNAKRCLLLEISSFLMEGAQKDLID
LVFSFVKDTFQESNDHGHAEAYNALSKILEINSVEEQQEEEEEEEKEDSKAFFILNEIIL
VLKDAKEESRKEAYDVLINISSSLRSISPVSSVAPCQKLINMIVGYLSGSSPQITSGAVS
ALSVLVYKDTDICLSIPDLIPSVLSLLQSKAVEVIKAVLGFVKVVVSCLRNEDLQSLLSD
IVDGVISWSSVSRHHFRSKVTVILEIMTRKCGFAAVQLVTPEKYKGFLKTVMENRRNKTS
NEGRIENKEASANQKDVRGRGYKRRLKNKDGSPHSGEYETSLTADGRLEGSKKNGDLAAG
KFSKIQSNNLERKGRGPFTNLKAGKRERWN
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatcgaagcatccgccgccgccatgaagccacagaagcacagacaacggaaa
caggaagagcgaccctcgttgcttcaacaggatcaacagatggagcacgaccacgccgac
gaaccgctgcgagacggcgccgacgtctgccaacagctcatggaccgctacgccaaatcc
tccgcccctcagcaccgccacctcctcgccaccgccgccgccatgcgcgccatcctcgac
gccgagtccctccccctcacgcccgcctcttacttcggcgccgccatgtccgccgtcgag
accacgtcctcgttgcaggccctggactccacggaggtcgcggcgctcatgtcgttcctc
gtgatcgtcctgcccgcggtgccgccgcaggggatcgcgcccgcgagggcgagggaggcg
gcggaggtgttggcggaggtgagggaggaggagaagctggccgtgtccagcgtgaggtcc
gcggtgaagtgtttgggggttttgcttgggttttgcgacttggaggattgggattcggtg
aaattcgggttgaagacgcttttgaagttctccctggccaagcgtcctaaggttcggcga
tgtgcacaagaatgtcttgaaaaggtttttaaatgctttaagtcctctagtgttgttagg
aaagcaagcaagctggtactgtcttcttttgaaagttgcatttcttcagcagattggtca
aggactacaagtcctgaggatggatctacagatgataaactgttgaaatccgagaatata
ggattcttacatatgcttaatgtgctggtatctgtttgtccgtatctgtctgccaaagta
agcattcagattctttcagaattagacaagcttatgagtctcgggttctcagcgcttaca
acactgattcttaaaatcatcgaggcattattggaaactctagcagtgggagatactgtt
caagagatagaaaatgtcatcacttctcttgcttcttatgtttcttcaaaagagaactcg
gtggacactgtcatgactgctgcaaacttgttaagagttgctctgaataaattccacact
ggaggatcaagcttgtggattaagaaccttcctgtagtttgggagtctctagcaggactt
cttgttggtgaggctgatgctgcatcgcaggcctcgagtattttgaaggacttgattaat
gaacaagtaaatgaagagactttccatatggagagccaaccaagtgatgacgtaagtgag
gagagtctggaaacaattgcaataaggagaatatgtattgctttggaaagtgccctcagt
gcccatggcgaaactccaaatcagcatgcactttccgtaatctctcttttgtacctcaaa
cttggaaaaacttcttacatctatatgaggagtatcctgctcaaacttgttcacttaatg
acctcagctgaaaggggcccatctatcacaggccatcttcagagatgtattggttctgct
gtaattgctatgggcccagaaaagatgctttctgttgtgcctatttcactgcatcctgac
aattttagttctagtaatgtttggttggtgcccattctaagagattatgtggttggttca
tcacttgagtattacatggattatattgtgcccctcgcaaaatctttcaagcgtgctagt
tctggagttaagaaatcagtacttggtaaggagctgctgggtcatgctcatgacctttgg
aaactgttaccagccttttgccggggttcaagtgatacagacaaacagtttagacgtttg
gcagtattattgactgattttcttaaaaaatattcttttatgcatgaaagtgtggctctt
gctttaaagatccttgtgaatcagaatacaagtgtactcagctctagagtagttaaagat
ttagacacctgtaatgtgcaagcatccggattagaattgcaaactctaccgatttactca
aagaaaactgcaagcagaaatatcaaggctttaagttcatgctctactgagttgcttcaa
cttttattggacttatttgtcgattccattcctgcgacaaggtcatacttgaaggatcct
attggttgcttagcttctatcacggattcttctgcaaccagagaaatttttgtgtcattt
ctcaaaagatttggcattctaaataagagagatgagttcgagaggggaagagatgaaatg
gatgcatcaacggacaaagaaccaggaaatgagcatgccattgatgtaaatgctaaaagg
tgcttgttactggagatatcctcgtttcttatggaaggagcacagaaggatctcattgat
ttggtgtttagctttgttaaagacacttttcaggaaagcaatgaccatggccatgctgaa
gcctataatgctttgagcaaaattttggagataaactctgtggaggagcagcaggaggag
gaggaggaggaggagaaagaagattcaaaagcttttttcatcctcaatgagattatactt
gtcttaaaggatgctaaggaggaatctaggaaggaagcttatgatgttctcatcaacata
agttccagcttgagaagcatttcgcctgttagttcagttgcaccttgtcagaaactgatt
aacatgatagtgggctatctttctggttcatcacctcaaattacaagtggagctgtttct
gcattgtccgtactagtttacaaggatacagatatctgtctatcaattcctgatcttatt
ccttctgttctttctctgctacaaagcaaagcggtggaagtgataaaagctgttctaggt
tttgtgaaagtagtagtgtcttgcttacgaaatgaagaccttcagagtttactttcagac
attgttgatggtgttatttcatggtcatctgtctccaggcatcacttcagatcaaaggtc
acagtcattcttgagataatgactaggaagtgtggttttgctgctgttcagcttgttacc
ccagaaaagtacaagggttttcttaagacagttatggagaatcggcgaaacaaaacctca
aatgaaggcaggatagagaacaaggaagcttccgcaaatcagaaagatgtcaggggacga
ggatacaaaaggagattgaagaacaaagatggctccccccactcaggagaatatgaaact
tctcttactgctgatggcagattagaaggttctaaaaagaatggtgatttggctgcaggg
aaattttctaagattcaatccaacaatctggaaagaaaaggaagaggacctttcacaaac
ttaaaagcggggaaaagagaaagatggaactaa
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