Eucalyptus grandis (rose gum): 104425641
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Entry
104425641 CDS
T03547
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104425641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104425641
03036 Chromosome and associated proteins [BR:
egr03036
]
104425641
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104425641
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104425641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
104425641
NCBI-ProteinID:
XP_010036680
LinkDB
All DBs
Position
11:27669060..27688543
Genome browser
AA seq
1089 aa
AA seq
DB search
MEDEMDASPSYFDPEDLSIREQFRRYGRGQSSTSNISPQKRSGSMVRQGSLLYDGPRIHS
PTNAALLLDIIKQEASGFDADYAEGTPARTQSSSKRRYSIESQWKLEAEMGFDSVRRAGS
YSLKACKQEDESSSDSGETTFSLFASLLDSAIQGLMSIPDLILRFESSCRNVSESIRYSS
NMKHRIVEDKLMRQKAQFLLDEAASWSLLWYLYGKGNEDIPKDVYLYPTTSHLEACQFVS
NDHTAQLCLRVVQWLEGLASKALDLESKVRGSHVGTYLPSSGIWHHTQRFLRKGRSDTDT
VRHLDFDAPTREHAHQLPDDKKQDNLLLEDVWTLLRAGRVDEACDICRSAGQPWRAATLR
PFGGLDLFPSCEALVKNGKNQTLQAIELENGIGHQWRLWKWASHCASERIAEKDGCKFEA
AVYAAQCSNLRCLLPICTDWESACWAMAKSWLDVLVDMELARLQPGGMTHSKSYGDEVDG
SPEQTEGTSQSSSGPENWPLQVLNQQPRHLSALLQKLHSGDAVHEAVMRGCKEQQRQIEM
KLMEGNIPQLLDLIWSWIAPSEDDQNIFRPHGDPQMIRFGAHLVLVLRYLLADEVKDAFK
EKIMTVGDFILHMYAMFLFSKQHEELVGIYASQLARHRCIDLFAHMMELRVNSSVHVKYK
IFLSAIEYLPFSPRDDSKGSFEEIIERVLSSSRETKVRKYDNTLDVAEQHRLQSLQKAMV
IQWLCFTPPSTITDVELVSVKLLLRALMHSNILFREFALISLWRVPAMPIGAHKLLSFLA
EPLKQLSENLGALENYDISEDLSEFEDWSEYYSCDATYRKWLKIKQENAEVSAVELSQEE
KERGSAAAREALQSARSLLLRKEHPWLPSREENVYEAVEPIFLELHASAMLCLPSGECMC
PDATICATLMSALYSSVSEEVVLDRQLMVNVAISSKDKYCIEVVLRCLAIEGDGLGVHVL
NDGGILASMVAAGFKGELARFQIGVTMEISRLDARYSNKGGSLEGPASYIVRGLCRRCCL
PEVVLRCMQVLVSVVESGGPSESHDDLIELITSPETGLLHLFSQQQLQEFLFLEREYSIC
CMEQRQVDE
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatggatgcatctccaagctacttcgacccggaggatctctcaattaga
gagcaattccgacgatacgggagagggcagtcatcgacttccaacatatcgccccagaaa
cgttcgggatcaatggtgcggcagggtagtttgttgtacgatggaccgcgcatccacagc
ccaacaaatgctgcacttcttcttgacatcatcaagcaagaagcctcgggcttcgatgct
gattatgcagagggaacgcctgcgaggacccaatcttcttccaagagaagatactccatc
gagagtcaatggaagttagaggccgagatgggttttgattcggtccgaagagctggaagc
tattcgctgaaagcttgtaagcaggaggatgagtcatcatcggacagtggagagacaacg
ttctctttattcgcttctctcctggattctgctattcaagggctgatgtctatacctgat
ctaatactacgatttgagtcatcttgtaggaatgtttcagagtcaatcaggtatagttcc
aatatgaagcatcgtattgtggaggacaagctaatgagacaaaaggctcaattcttactt
gatgaggctgcttcatggtctctcctgtggtatctatatggaaaagggaatgaagacatc
ccaaaagatgtatatttgtatccaactacatcacatttggaggcttgtcagtttgtttca
aatgaccatacagcacagttgtgcctccgggttgttcagtggttagagggactagcttcc
aaagcgcttgatttggaaagcaaggtgcgaggatctcatgttggaacctacctacccagc
tctggaatctggcatcacactcagaggtttctgaggaagggtcgttctgatacggacact
gttcgtcacttggattttgatgctccaacacgtgaacatgcacatcaactgcctgatgac
aaaaaacaagataatttgctattggaagatgtgtggactttattaagggctgggagagtc
gatgaggcttgtgacatttgtcggtctgctggacagccatggagagcagcaactcttcgt
ccatttggagggttggatctatttccttcctgtgaagccctggtaaagaacggaaaaaat
cagactctacaagcaattgagttggaaaatggcattggacaccagtggcgcctctggaaa
tgggcatcccattgcgcatcagagaggattgctgagaaagatggttgcaaattcgaagct
gctgtatatgcagcccagtgtagcaatttgaggtgcttgcttccaatatgtacagactgg
gagtctgcttgctgggcaatggccaagtcctggcttgatgttctggtggacatggaactt
gctcgtttgcagcctggtggaatgactcattcaaagagttatggagatgaggttgatggc
agtcctgaacaaaccgagggcacatcccagtcttcttcagggcctgaaaattggccgctg
caagttcttaaccagcagccacgacatctttctgctcttcttcagaaacttcactcgggt
gatgctgtacatgaggctgttatgcgaggatgcaaagagcagcaaaggcaaattgagatg
aaacttatggaagggaatataccccaattgctggatcttatctggtcatggatagcacct
tcagaagatgatcaaaatatcttcaggccacatggggatcctcagatgattaggtttgga
gctcatttagtacttgtgctaagatatctccttgctgatgaagttaaggatgccttcaag
gagaagattatgacagttggtgatttcattcttcacatgtatgcgatgtttctgttctca
aaacagcatgaggaattggttgggatctatgcttctcagcttgcccgccaccgatgcatt
gacctctttgcccacatgatggaacttagggtgaacagcagcgtacatgtgaagtataag
atcttcctttctgctatagagtacttgcctttttctcctagggatgattcaaagggaagt
tttgaagaaataattgagagggttctgtcaagttcaagagaaaccaaagttagaaagtat
gataatacattggacgttgctgagcagcatcgccttcaaagccttcaaaaggctatggtc
attcagtggctctgcttcacaccaccttccaccattacagacgttgagcttgttagtgtc
aagctgctgcttcgtgctctgatgcatagcaatatattattcagggaattcgctttgatt
tccctgtggagagtgcctgcaatgcccataggtgctcataagttacttagcttccttgct
gaacctctgaagcagctgtcggagaatcttggggctcttgagaattatgacatctcggag
gatttaagtgaattcgaagactggagtgagtactactcatgtgatgcaacttatcgtaaa
tggcttaaaatcaaacaagagaatgcagaagtttctgcagtagaactctcgcaggaggag
aaggaaagaggttctgctgcagctagagaagccctacagtcagcacgttcattattactt
aggaaagaacatccttggttgccttctcgtgaagaaaacgtgtatgaggcagtggagcct
attttccttgagttgcatgcatctgcaatgctctgccttccatctggtgaatgcatgtgt
ccagatgccacaatttgtgctacactgatgagtgcactttactcttcagtgagtgaggaa
gtggtgctagatcgacaattgatggtaaatgttgctatctcatccaaggataagtactgc
attgaggtcgtcctaaggtgcttggccattgaaggtgacgggttgggagtccatgtgctc
aatgatggtggcatacttgctagtatggtggcagctggctttaagggtgagcttgctcga
tttcagattggagtcaccatggaaatctcccgattagatgctcggtattcaaataaaggt
ggttctttggaaggcccggcatcatacattgtccggggcctgtgtcgtaggtgttgtcta
ccagaagtcgttctgcgatgcatgcaggtcttggtgtcggtcgtggagtctggtggccct
tctgaaagccatgatgatctgattgaactgatcacttcacccgaaacagggctccttcat
ctgtttagtcagcaacaattgcaggaatttttgttcttagagagggaatactccatatgc
tgcatggagcaacggcaagttgatgaatag
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integrated database retrieval system
