Eucalyptus grandis (rose gum): 104425828
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Entry
104425828 CDS
T03547
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
egr04990
]
104425828
Domain-containing proteins not elsewhere classified [BR:
egr04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
104425828
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
104425828
NCBI-ProteinID:
XP_010036941
UniProt:
A0A059A4C5
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All DBs
Position
11:43730584..43736456
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AA seq
607 aa
AA seq
DB search
MTQLAETYACMPSTERGRGILIAGNPKPGSNSVLYTNGRSVVILNLDNPLDISVYAEHAY
PATVARFSPNGEWVASADSSGAVRIWGAYNDHVLKKEFKVLSGRIDDLQWSPDGLRIVAS
GDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPF
KFKLSRRDHSNFVNCLRFSPDGNRFISVSSDKKGIIYDGKTGEKIGELSSDGGHTGSIYA
VSWSPDSKQVITVSADKSAKIWDISEDGSGNLRKTLTSSGSGGVDDMLVGCLWQNNHLVT
VSLGGTISIYTAGDLDKAPVSFSGHMKNVSSLSVLKGDPKVILSSSYDGLIIKWIQGIGF
SGRVQRKESTQIKCLAAVDEEIVTSGYDNKVCRVSGSGDAEFIDIGCQPKDLSLALQCPE
FALVSTDTGVVLLRGAKIVSTINLGFAVTASTVAPDGTEAIIGAQDGKLRIYSISGDTLT
EEAVLEKHRGAISVIHYSPDLSMFASGDLNREAVVWDRSSREVRLKNMLYHTARINCLAW
SPDSSTVATGSLDTCVIIYEVDKPASNRLTIKGAHLGGVYGLAFTDDFSVVSSGEDACIR
VWKINRQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagctggcggagacctacgcgtgcatgccctcgacggagcgcggccgcgggatc
ctcatcgccggcaacccgaagcccgggtccaactccgtcctctacaccaacggccgatcc
gtcgtcatcctcaacctcgacaacccgctcgacatctccgtctacgccgagcacgcctac
cccgccaccgtcgcccgcttctcccccaacggcgagtgggtcgcctccgccgactcctcc
ggcgccgtccgcatctggggcgcctacaacgaccacgtcctcaagaaggagttcaaggtc
ctgtccggccggatcgacgatctccagtggtcccccgacggcctcaggatcgtggcttcc
ggcgatgggaagggcaaatcgctcgtccgcgcgtttatgtgggactcaggcaccaatgtg
ggagaattcgatggccattcacgtcgagttctgagctgtgcttttaagccaactcggccc
tttcgcattgtgacttgtggagaggattttttggtgaacttttatgaaggaccgcctttt
aaattcaagctgtctcgcagggatcattccaactttgtcaactgcttgagattttctcca
gatggcaataggttcattagcgtgagctctgataaaaagggaatcatctatgatggtaag
actggtgagaagataggagagctgtcatctgatggtggtcacacaggtagcatttatgct
gtcagttggagtcctgatagtaagcaggttataactgtgtctgctgacaagtcagcgaag
atatgggacatttctgaggatggcagtggtaacctgaggaaaacattgacttcttctggt
tcaggcggggttgatgatatgttagtcggttgtctttggcaaaacaaccacctagtcact
gtctctcttggtggcacaatcagcatatacacagcaggtgatcttgataaagcacctgtc
tctttttctggacacatgaagaacgtctcttccttatctgtgctcaaaggtgatccaaaa
gtgatcctctccagcagctatgatggtcttataataaaatggattcaaggaattggattt
agtggcagagtacagaggaaagagtctacacaaatcaaatgtttggctgcagtagatgag
gagattgtaacctctggatatgataataaggtatgcagagtttctggcagtggagatgca
gaattcattgacattggctgtcaacccaaggacttgagtcttgctcttcagtgtcctgaa
tttgctttggtttcaaccgatactggagttgtcttgctccgcggtgcaaaaattgtgtca
accatcaatcttgggtttgctgtgacagcatcaactgtcgcaccagatggaactgaagca
attattggcgcacaggacggaaaattgcgcatatattctatttcaggtgatacattaaca
gaggaagctgttctggagaaacacagaggtgctattagtgtcatacactactcgcctgat
ttatccatgtttgcttctggggatctgaacagagaggctgttgtttgggatcgttcctca
agagaggtgaggctgaagaatatgttgtaccacacagcccgcatcaactgtttggcttgg
tcccctgatagcagcacagtagcaactggatcgcttgacacttgcgtcatcatctatgaa
gttgacaagccagcatctaaccgtctaaccataaaaggagctcacttgggtggggtttat
ggattagctttcaccgacgacttcagtgtggtcagttctggtgaggatgcgtgcattcgt
gtctggaagataaacagacagtga
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