Eucalyptus grandis (rose gum): 104425889
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Entry
104425889 CDS
T03547
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104425889
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104425889
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104425889
NCBI-ProteinID:
XP_010037043
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Position
11:43093275..43095753
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AA seq
391 aa
AA seq
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MASPRTMPATIPCHFALAFLIAVLFSPAPSLTHGSQQSPSGLNTIDQCWRTNPNWRRQRQ
QLARCSVGFSGKMTSNIGKGTVRYTVTDPSDDPLRPRPGTLRYGATLINGEVWITFERDM
TINLQKPLLVSSFTAIDGRGVTVHITGGGCLLVYKATDVIIHGLYIHNCQAQPPSQVIGP
DSKILPLGQVDGDAIRLVTATKVWIDHNTLYACQDGLLDVTRGSNQVTISNNWFRDQDKV
MLLGHDDGYIRDRNMKVTIVYNHFGPNCNQRMPRVRHGYAHVANNLYQGWEQYAIGGSSG
PSIKSEANLFIAPKGGNKEVTWRLGSHASKTAWSFYSVGDVFENGASFRKKGRLGGAKPH
YNKQQSFTVADAQSVRSLTSSSGVLKCSRTC
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctcgcaccatgcccgccaccatcccttgccacttcgccttggcattcctc
atcgccgttctcttctctccggccccaagcctcacccatggatcgcagcagagcccctcc
ggcttgaacacgatcgaccagtgctggaggacaaaccccaactggcggaggcagcggcag
cagctggcccgctgctcggttggtttcagtgggaagatgaccagcaacatcggcaagggg
accgtgcggtacaccgtgaccgacccaagcgacgacccgttgaggccgagaccggggaca
ctgaggtatggagccactttgataaatggcgaagtgtggatcacgttcgagagggacatg
accatcaatctccagaaacctctcctcgtgagtagcttcaccgccatagatggccgcggc
gtgactgttcacatcaccggaggtggatgtttattggtctataaggctacggatgtgatt
atccacggcctatacatccacaattgccaagcgcagccaccgagccaggtgatcgggcca
gactccaaaatcctgcccctcggccaagtagacggtgacgccatccggctcgtgacggcg
acaaaggtgtggatcgaccacaacacgctctatgcatgccaggacgggctcctcgacgtc
acacgagggtccaaccaggtcaccatctccaacaactggttccgtgaccaagacaaggtc
atgctcctcggccatgacgacggctacatccgcgaccgcaacatgaaggtcaccatcgtg
tacaaccacttcggccctaattgcaaccagcgaatgccaagggttcgacacggatacgca
catgtggcaaacaacttgtaccagggatgggaacaatatgcaatcggaggaagctcgggc
ccgagcatcaagagcgaagccaacctgttcatcgcaccgaaaggaggcaataaggaggtt
acatggagactaggaagccacgcgagcaaaacggcttggagcttctactcagtgggggat
gtgtttgagaacggagcttctttcaggaaaaagggaaggcttggcggcgcgaagcctcac
tacaataagcaacagagctttacagtcgccgatgcacaatccgtgaggtcgctgacgagc
tcgtcgggtgtgctcaagtgctctaggacatgttga
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