Eucalyptus grandis (rose gum): 104425899
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Entry
104425899 CDS
T03547
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104425899
Membrane trafficking [BR:
egr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104425899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
104425899
NCBI-ProteinID:
XP_010037068
LinkDB
All DBs
Position
11:43019500..43038483
Genome browser
AA seq
1844 aa
AA seq
DB search
MESSQSSNRFRRIPRQSTNCATTSHLKLDPLLDENPEQWPHLNELVHCYRTDWVKDDSKY
GHYESVSPVHLQNQIFEGPDTDIETEMRLACARQAKADDTTDDDVPSTSGRQFTEATSSD
SKHFGLSPLPTYEPAFDWQNERSMIYGQRIPDSHSSQHGSGLKISVKVLSLSFQAGLVEP
FHGTICLYNRERREKLSEDFYFRVLPTETQDNKMSNEPRGIFYLDAPSASVCLLIQLEKP
ATEEGGVTSSVYSRKEPVHLTERERQKLQVWSRIMPYRESFAWAIVPLFDNTIGAASGGS
ASPSSPLAPSISGSISHDGGVEPVSKITLHGKLGYSSGSSVVVELSNLNKVKESYTEDSL
QDPKRKVHKPVRGVLRLEIEKHQTGHVDLENVSENGSMTNDSVDPGDTITASTFSKCPSN
GSDGTQSSNIKQHSFDGKEASDNRLNIQGNSDFNADDFQAFDFRTTTRNEPFLQLFHSLY
VYPLTVALSRKRNLFIRVELRKDDADVRRQPLEALYPREPGASPQKWVHTQVAVGARAAC
YHDELKLLLPAIWTPLHHLLFTFFHIDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLP
IMRELVPHYLQDAGKERLDYLEDGKNVFRLRLRLCSSLYPINERVRDFFLEYDRHTLRTS
PPWGSELLEAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAVVNILTRAQ
QESVDDNERNRFLVNYVDYAFDDFGGRQPPVYPGLSAVWGSLARSKAKGYRVGPVYDDVL
AMAWFFLELIVKSMALEQTRLFYHVLSLGEDIPPMQLKEGVFKCILQLYDCLLTEVHERC
KKGLNLAKRLNSSLAFFCYDLLSVIEPRQVFELVSLYLDKFSGVCPSVLHDCKLTFLQII
CDHDLFVEMPGRDPSDRNYLSSVLIQEIFLSWDHDDLSQRAKAARILVILLCKHEFDARY
QKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVILQIVRNLDDTSLVKAWQQ
SVARTRLFFKLMEECLTLFEHRKPSDGMLLGSSSRSPAGDGPVSPKYSERLSPAINTYLS
EASRQEVRPQGTPENGYLWQRANSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHP
ILRQKLELWEENLSAAVSLQVLEITEKFSTMASTHSITTDYGKLDCMTAIFMNFFSRNQP
LEFWKALSPVFSSVFDLHGATLISRENDRFLKQVAFHLLRLGVFRNDSVRKRAVVGLQIL
VKSSFYHLMQSARLRVMLTITISELMSEVQVTQMKSDGTLEESGEARRLRNSLEEMANEG
KSPSILKECGLAENSLVSIPERMTENRWSWSEVKYLSDCLLLALDASLEHSLLGSLMNMD
RYAAAESYHKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVAR
NDGVWSKDHVTALRKICPMVSSEISCEASAAEVEGYGASKLTVDSAVKYLQLANNLFSQA
ELHHFCASILELVIPVYKSRRAYGQLAKCHTLLTDIYASILEQESSPIPFTDATYYRVGF
YGEKFGKLDRKEYVYREPRDVRLGDIMEKLSHIYESRMDGNHTLLIIPDSRQVKAEELQP
GVCYLQITAVDPVMEDEDLGSRRERIFSLSTGGVRARVFDRFLFDTPFTKNGKTQGGLED
QWKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEG
DQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVC
KRAIRVHFRLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcgcagtcgtcgaatcgttttcggagaattccgcgccagtccaccaactgc
gccaccacctctcatcttaagttggacccattgcttgatgaaaatccggagcaatggccg
catttaaatgaacttgtccattgctatagaactgactgggtaaaagatgatagcaagtat
gggcattatgaaagtgtcagtccagttcatcttcaaaatcaaatatttgaaggacccgac
actgatattgagacagagatgcgtcttgcctgtgccaggcaagcaaaggcagatgacact
actgatgatgacgtccctagcacttcgggaaggcaatttacagaggctacatcttctgac
tctaagcattttggtctatctccactgcctacttacgaaccagcattcgattggcaaaat
gagaggtcaatgatatatgggcagaggattccggattctcatagctcgcagcatggcagt
ggattgaagatctcggtgaaagtgttatctctctcatttcaagcaggattagtcgagcca
tttcatggtacgatatgcctgtacaatagggagaggagagaaaagttgtcagaagatttt
tattttcgagtgctaccaactgagacacaggataacaaaatgtcaaatgagccacgtgga
atcttctatctggatgcaccatcagcatcagtttgtctgttaatccagctggagaaacct
gccactgaagaaggcggagttacttcatccgtttattcacgcaaggagcctgtgcacttg
actgagagagagaggcagaaattgcaggtgtggtcccgaatcatgccatacagagagtcc
ttcgcctgggctattgttccattatttgataacaccattggtgcagcttctggtggttct
gcttctccaagtagccctcttgctcctagcatttctgggtccatctcccatgatggtgga
gtggaacctgtttctaagatcacattacatgggaagctgggttattcaagtggaagctca
gttgtagttgaactatcaaacttaaacaaagttaaagaaagctacactgaggattcactt
caggatccaaagcgcaaggttcataaacctgtgagaggtgttttgagacttgaaattgaa
aaacaccagactggtcatgttgatttggagaatgtatcagaaaatggtagcatgaccaat
gattctgttgatcctggtgatactattactgcttctactttttcaaaatgtcctagtaat
ggttcggatgggacccaaagtagcaatatcaaacagcattcctttgatggaaaagaagcc
tcagacaatagattgaacatccaaggaaattcagacttcaatgctgatgatttccaagcc
tttgacttccggaccaccacaaggaatgagcctttcctgcagctttttcattctctctat
gtatatcccctaacagtggctttgagtcggaagaggaacttgtttatacgggttgaactt
agaaaggatgatgctgatgtgcgtagacagcctctggaggcactgtatccaagggagcca
ggtgcatcaccacagaagtgggtccatacacaagttgccgttggagctagggcagcttgc
tatcatgacgaacttaaacttcttcttcctgccatttggaccccgcttcatcacctatta
ttcactttcttccacattgaccttcaaacaaagctggaagctccaaagccggtggtgatt
ggttatgcagcacttccactatctacacatgctcagttgcgatctgaaatttctttgcct
atcatgagagagctagttccgcattatcttcaggatgctggaaaggagaggttggactac
ttggaagatgggaaaaatgtgtttagattgcgcttgagactctgctcatctttgtaccct
attaatgagcgagttagggatttttttcttgaatatgatagacacacactgcggacaagc
ccaccctggggttctgaacttctggaggctattaacagtctaaagaatgttgattctact
gctttactccagttccttcacccaatcttgaatatgctactacatcttataggcaatggt
ggagaaacccttcaggttgcggctttcagggctgtggtgaatattctgactagggcgcaa
caggaatctgtggatgacaatgaaagaaatcgttttcttgttaactatgttgattatgca
tttgatgactttgggggacgtcaaccaccagtttatcctggtctctctgctgtttggggg
agcttagctcgaagtaaggctaagggctaccgtgtcggaccggtctatgatgacgtattg
gctatggcttggtttttcctcgaactaattgtcaagtcaatggccttggagcagactcga
ctattctatcacgttctttcactaggtgaagatattccacctatgcagctgaaagaaggt
gtatttaaatgcatattgcagttgtatgattgccttctaacagaagtccacgagcgttgt
aagaagggattaaacttagcaaagcggttgaatagtagcttggccttcttctgttatgat
ctcttatcagtgattgaacctcgccaagtttttgaactagtgtccttgtacctggacaaa
ttttctggagtatgtccatcggttcttcatgattgcaagctcacattcttacagattata
tgtgaccatgatcttttcgtggaaatgcctggaagagacccttcggataggaactacctt
tcatctgtcctaatacaagaaattttcctcagctgggatcatgatgatttgtctcagcgt
gcaaaggcagctagaatattagtcatcctcctatgcaagcatgagtttgatgctcgatac
cagaagcctgaagataaactctacattgcacagctatattttccactcatcggacagatc
ctagatgagatgcctgtcttttacaatctgaatgctgtggagaagcgtgaagttctgatt
gttattttgcaaattgtgcgcaacctagatgacacgtcacttgtcaaggcgtggcagcaa
agcgttgctcgaacccgactatttttcaaactcatggaagagtgccttactctctttgag
catagaaaaccttctgatggcatgctccttggctccagttctcgcagccccgctggggat
ggacctgtctccccaaagtactctgagagactttctcctgcaattaacacgtatctttca
gaggcatcaagacaagaagttagacctcagggaacacctgagaatggttatttatggcaa
agagcgaactcccagttgagctccccaagtcagccgtattctttgagagaagccctagct
caggctcaatcttcaaggattggagcttcagctcaagctctgagagaatccttgcaccca
attttgaggcaaaaactggagctttgggaagagaatttaagcgctgctgtcagtcttcaa
gttctggaaataaccgagaaattttccacaatggcatcaactcatagcatcacaacagac
tatgggaaactcgattgcatgactgctatttttatgaatttcttctcccgaaatcaacca
ctggagttttggaaagctttatcacctgtcttcagcagtgtctttgatcttcatggagct
acccttatatccagggagaatgatcgattcttaaaacaagttgcttttcatctgctgcgg
cttggagttttcagaaatgacagtgttcggaaacgggctgttgttgggcttcagatactt
gttaagagttctttctatcacttaatgcaatctgcaaggttaagggtcatgctgaccatt
acaatatcagagttgatgtccgaggtgcaagtcactcagatgaaatctgatggtacacta
gaggagagtggtgaggcacggcgacttagaaattctttggaggaaatggcaaatgaaggc
aagagccctagcatattgaaagaatgtggtcttgcagaaaattctctcgtctcaattcca
gaaagaatgacagaaaatcggtggtcctggtcggaggtcaaatatctctctgattgcctt
cttttggcactagatgcaagccttgagcattctcttttgggatctttgatgaatatggat
agatatgctgctgcagagagttatcacaaacttgctatggcttttgcccctgtcccggat
cttcacattatgtggttgttgcacttgtgtgatgcacaccaggagatgcagtcttgggct
gaagctgcacaatgtgctgtggctgttgctggtgttgtaatgcaggccctagtagctaga
aatgatggtgtctggagtaaagaccatgtgacggcactacgtaaaatttgcccaatggtc
agcagtgagatcagctgtgaggcatctgctgcagaggttgaagggtatggtgcttcgaaa
ctcacagtagactctgctgtgaaatatctgcagcttgcaaacaatcttttttctcaagct
gagcttcatcatttctgcgcaagcattctggaacttgtgattccagtttacaaaagcagg
agagcatatggacagctggcaaaatgtcacaccttgctcaccgatatctatgcgtcaatc
cttgagcaggaatcgagcccaattccttttacagatgctacatattacagggtgggattc
tacggggaaaaatttgggaagctggataggaaggaatacgtttatcgggagccccgtgat
gtgcgccttggtgatattatggagaagcttagtcatatttatgagtcccggatggatgga
aaccatacactgctcattatcccggattctagacaagtaaaagccgaagagttgcagcca
ggagtttgctatctacagataactgctgttgatcctgtgatggaagatgaagatttgggg
agcagaagggagaggatcttttctctatctactggtggggtccgtgcacgtgtttttgat
cgctttttgtttgataccccatttactaaaaatggcaagactcaaggtgggttagaagac
caatggaagaggcggacggtccttcagactgagggctcattccctgcccttgtgaacagg
ctcttggtgattaaatctgagtctcttgagttttcgccagtagaaaatgcaattggcatg
attgaaacccgtacagctgcactgcgcaatgaacttgaagagcctcgcagttctgaagga
gatcaactcccacgcttgcaaagtctgcagagaatcctccaaggcagcgtggcagtccaa
gtgaatagtggggttcttagtgtttgcacggctttcctgtcgggtgagcctgccacaagg
ttgcggtcccaagaactacagcaactcatcgctgcacttctcgaattcatggctgtttgt
aagcgtgcgatacgggttcacttcagattgatcggggaggaagatcaagaattccacacg
cagcttgtgaacgggtttcaatctctcactgcagagttatctcattatatccccgccatc
ctctcggagctttga
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integrated database retrieval system
