Eucalyptus grandis (rose gum): 104426099
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Entry
104426099 CDS
T03547
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104426099
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
egr01002
]
104426099
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104426099
03036 Chromosome and associated proteins [BR:
egr03036
]
104426099
Peptidases and inhibitors [BR:
egr01002
]
Metallo peptidases
Family M1
104426099
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104426099
Coactivators
SAGA/TFTC/STAGA complex
104426099
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104426099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
104426099
NCBI-ProteinID:
XP_010037343
LinkDB
All DBs
Position
11:32726866..32743194
Genome browser
AA seq
1328 aa
AA seq
DB search
MAKARKAKNTNDDSKPDNPGAVVRHQKLCLSVDLPNRRIYGYTELEIAVPDIGIVGLHAE
NLGISSVLVDGEPSEYEYYPHSQNLDNERRWSSVKSPACAADVAGSLYLSALERELVPNL
LINCCKGFKVENESQEQLALENASQSSGEVKQNVKLVRIEYWVDKAETGIHFEDNILHTD
NQIRRARCWFPCMDENSQQCCYDLEFTVAHDLVAVSTGKLLYQVLSKDDPPRKTYAYRLD
VPVSAWWISLVVAPLEIFPDPQNCLISHMCLPAYKSKLQNTVAFFYSAFSSHYEEYLGEK
FPFGSYKQIFIAPEMAVSSSSLGASMSIFSSQVLYDENIIDKTIDTRIKLAYALARQWFG
VYITPAGPDDEWLLDGLAGFLTDSYIKKYLGNNEARYRRFKANCAVCKADDSGATTLSSS
GSCKDLYGTQSLGLYGKIRSWKSVAVLQMLEKQMGPESFCKMLQAIVARGLDATQPSRTL
STKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRSCTAR
PDAEPPNTNAESEAREAEVGWPGMMSIRVNELDGMYDHPILPMAGDSWQLLEIQCHSKLA
ARRFLKPKKGSKADGSDDNGDAALDARSSSESPLLWIRADAEIEYISEIHFNQPVQMWVN
QLEKDKDVVAQAQAIATLAALPECSFAIVNALNNFLCDSKAFWRVRIEAAFALATTASED
TDWAGLLHLVKFYKSRRFDANIGLPKPNDFRDIPEYFVLEAIPHAVAMVRGADGKSPREA
VEFVLQLLKYNDNNGNIYSDVFWLATLVQSIGELEFGQQTILLLSSLLKRIDRLLQFDRL
MPSYNGILTVSCIRTLTQIALKFSALIPLDRIFDLIKPFRNLKSLWQVRVEASRALLDLE
FQYKGLNAALSLFIEFLEEEPSLRGQTKLGMHAMRLCQMRGATDSADDIQSIVTLLALLR
MLEGRLAFNNVLLRHYLFCILQIFAGRSPTLYGVPRDKTFHTGDPEACNEQEIIVPCFTT
EAKPLETPVIITNQSPEDVAIIEVPKEADTVSSSHERKKPVVKIKVKHSTATSKGDETGN
QSAAEKSQGRNNGPDHAASSSVSVDAPQKNFTEAVSISNHNLEEVNSCQNPGSRVTASIG
SAKLAGEGDDMGKELQCTADSGNMLVHPRLLGDTDLGADALKYASLQSLSAATVNDSSLA
LGDSPHRKEKKAKSDKDKKRRREDRKGHKEDSEYLERKRLKKEKKRKQKELAKLLNCEPS
KTSMELPSRSKDPGIKEPEFKSVTVQAKTNEVGSSNMLVTKVEARAETPEASTAPKFRIK
IKSKPLNR
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcgcgcaaggccaagaacaccaacgacgactcgaagcccgacaatcccggc
gccgtcgtccgccaccagaagctctgcctctccgtcgacctccccaaccggagaatctac
gggtatacggagctagaaattgcagttccagatattggaatagtgggattacatgctgaa
aatctggggatctctagtgttttggttgatggggagccttctgagtatgaatactatccc
cactctcagaatttagacaatgagagaagatggagctccgtcaagtctccagcttgtgct
gctgatgttgctgggtctttgtatctatcagctctggagagggaattggtcccaaactta
ttaattaactgctgtaagggtttcaaggtggaaaatgaatcgcaggagcaattggcgtta
gagaatgcttcacagtcatctggcgaggtcaagcagaatgtaaagctggtgcgaattgag
tattgggtggacaaagcagagacaggcattcattttgaggataatattcttcacactgat
aaccagatcaggcgggctcgttgttggtttccctgtatggacgagaactcacagcaatgc
tgctatgatttggaattcacagtggcccatgatcttgttgctgtcagcactgggaagttg
ctatatcaggttttgagcaaggatgatcctcctcgcaagacttatgcatacaggttagat
gttccagttagcgcttggtggatatccttggtggttgcgccacttgaaatctttccagac
ccccagaattgtctcatctcacacatgtgtttgcctgcttataagtccaagctacaaaat
accgtggcatttttttatagtgctttcagcagccattacgaggagtaccttggagagaaa
tttccatttggatcatacaagcaaatttttattgcacctgagatggcagtgtcatcatcg
agcttaggggcctcaatgagcatatttagttcccaagttttgtatgatgagaatatcatt
gacaagaccattgacacaaggattaaactagcttatgcccttgcaagacagtggtttggt
gtatatatcaccccagctggcccagatgatgaatggttgttggatggtcttgctggtttt
cttacagactcctatatcaagaaatatttgggaaacaatgaggcacgatatcggagattc
aaggcaaattgtgcagtttgcaaggcagatgacagtggtgcaactactttaagctcctct
ggttcttgtaaggatctgtatgggactcagtctcttggtttatatggcaagataagatca
tggaagtctgtcgcagtcctccagatgttggaaaagcagatgggacctgaatctttctgt
aagatgttacaggctattgttgctcgtggtctagatgcaacccagccttcaagaactttg
agcacgaaagagttcaggcattttgctaataaggtcggaaatctagagcggccatttctt
aaagaattttttcccagatgggtgggatcgtgtggatgtccagtgctaaggatggggttt
tcctataacaagaggaagaatatggttgagttggctgttttgaggagttgtacggctaga
cctgatgcagaaccacctaacactaatgctgagtctgaagctcgagaggctgaggtagga
tggcctggcatgatgagcatcagggttaacgaactggatggcatgtatgaccatcccatt
cttccaatggctggggacagttggcagttgttggaaattcaatgccattcaaaacttgct
gcacggcgtttcctgaagcctaaaaagggttcaaaagctgatggatcagatgataatggt
gatgcagcactagatgctcgttccagttctgaatcgcccctgctatggattagggcagat
gcggagatagagtatatttctgaaattcatttcaatcaacctgtgcaaatgtgggtcaat
cagttagagaaagacaaggatgttgttgctcaggcacaggctattgcaactttagcagcc
ctcccggagtgttcttttgctattgtaaatgctctaaataatttcctgtgcgactccaag
gccttctggagagttcgaattgaggcagcttttgctttggctaccacagcatcggaggat
actgattgggccggtctactacatttagtgaagttttacaagagccggaggtttgatgcc
aatattgggcttcccaagccaaatgacttccgcgatattcccgagtactttgttcttgag
gcaattccacatgctgtggctatggttagaggtgcagatggaaaaagtccaagagaagct
gtcgaatttgttttgcaacttctgaagtataatgacaacaatggcaacatttattctgac
gtgttctggcttgcaactttggtccaatcaattggcgagcttgaatttgggcaacagact
attctcctcttatcatcacttctcaagcgcattgaccggcttttgcaatttgacaggctc
atgcctagctataatgggatcttgactgtcagctgcatccggacattgacacagatagca
ctgaaattctctgcattaatccctcttgatcgaatcttcgatctaattaagcctttcagg
aatctgaagtcattgtggcaagtcagagttgaagcaagcagggctcttcttgatctcgag
ttccagtacaaaggccttaatgcagcactgtcactgtttattgaatttttagaggaagaa
ccatccttaagaggtcagaccaaattaggcatgcacgctatgcggttgtgtcagatgagg
ggggcaacggattcagctgatgacattcaaagcatagtaacacttttggctttgctgcgt
atgcttgaaggccgtctagcttttaacaatgtccttcttcgccactacttgttctgcatc
ttacagatctttgcaggaagatcccctacactttatggagtcccccgggataaaacattt
cacacaggtgatcctgaggcttgtaacgaacaagagattattgttccctgttttaccact
gaagcaaagcctctagaaactcctgtcatcatcaccaaccagtcacctgaagatgtggcc
atcattgaagttccgaaagaggcagatactgtttcaagtagtcatgaacggaagaaaccg
gttgttaagatcaaagttaaacactcaactgcgaccagtaaaggagacgaaacaggaaat
cagtctgctgccgaaaaatctcagggcaggaataacggaccagatcatgctgctagcagt
tcagtgtccgtggatgcacctcaaaagaatttcactgaagctgtcagcattagcaatcat
aatcttgaagaggtcaattcatgtcaaaatcctggttcacgtgtgactgctagcatcggt
agtgctaagctggctggtgagggcgatgatatggggaaggaactccaatgcactgccgat
tcgggtaacatgttggtgcaccctcggctccttggagacactgatttaggtgctgatgca
cttaagtatgcaagtctccaaagtctttcagcagctacagtaaatgatagttcattggct
ttaggtgactctcctcataggaaagaaaagaaggcgaagagtgacaaggacaagaaacgg
aggcgagaagaccgtaaaggacacaaggaagactcggagtacttggagcgtaagcgcttg
aagaaggagaaaaaacggaaacagaaggaactggccaagcttttgaattgcgagccttca
aagacttcaatggagttgccaagtagaagcaaagaccccggaatcaaggaacctgagttc
aaatcggtgactgtgcaagcaaaaacaaacgaagtgggcagctctaacatgttagttacg
aaggttgaggccagggctgagacaccggaggccagcaccgctccaaaatttcgaattaaa
ataaagagcaagccgctgaacagatga
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