Eucalyptus grandis (rose gum): 104426355
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Entry
104426355 CDS
T03547
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03440
Homologous recombination
egr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104426355
03460 Fanconi anemia pathway
104426355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104426355
03036 Chromosome and associated proteins [BR:
egr03036
]
104426355
03400 DNA repair and recombination proteins [BR:
egr03400
]
104426355
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104426355
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104426355
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104426355
FA (Fanconi anemia) pathway
Downstream FA components
104426355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
DGOK
Motif
Other DBs
NCBI-GeneID:
104426355
NCBI-ProteinID:
XP_010037673
LinkDB
All DBs
Position
11:39780240..39789447
Genome browser
AA seq
1231 aa
AA seq
DB search
MSAWQILPGGCGGGDYRWEPCGGHSGAALENEPNGAPTEQRLPNSRLPSMSDLLLQGRSK
LLENGDAASRSLPMFRTGSGKSVALKQSSVAKALSVLGDEDGDDFPDPGCSRLLENGDAA
LQSLPMFQTGSGKSVAPKQSSIAKALSVLGDEDGDDFPDPGCSKLLENGDAASRSLPMFR
TGSGKSVALKKSSIAKALSVLGDEDGDDFPDPGQAHVRDFRPDRSSFLFQTGSGKVVSAS
PTGMERAKTLLGLEEGTDQHDFAGLRPTRRPPIVNNTNRCQLASHLDRKEGLVHADALHS
LSAPSISFTCGTSLVETKLKDSGNCSNMQTKMCDIPSKPAPIKFQTAGGRSISISGDALK
RARSLLGDPELGDFLNEGNFDSRPFSFLNERETGDNSSNKENDSSMSFLCQGTPKRNHMP
NGFITPLRSSSNKACYPKVLEKPSFGDNLINKFDAAVCDSTDRSNFDVACLQKPLTTRSS
SSPVIGKSLANGIGPGMNPHVRLSGGSLMDISNRIDITCSGAGKVETRRLKKASFVSPFK
RPRSSAFSSPLKSDRLFSSSGLSTSLAKQSLHKGKVSSRYPSQIPRVYVSEYFAGPPQEQ
NTVQHIPDQLRRIKPDNAHKFVFTNESGLNGIGAEAFLHMLVQSGASTQHISKGWVTNHY
RWIIWKLASYERYYPATTGKFLTTTNVLEELKYRYEREINHGHRSAIKRILEGDASPAAM
LVLCVSAIHADDNLKTPSSTTPSNGTLNNNAMRLELTDGWYSVDALLDDLLSKHLMEKKI
YIGQKIRIWGARLGGWAAPVSPLEETRTVTLLLHANGTYRAHWADRLGFCKGAGAPLAFR
CIKSNGGPIPMTLVGVTRIYPILYRERFCSGDSIVRSERMEMKIRQLYNQRRSLVIEGAV
SEFQRSTKDFLLSNDSDSEEGAKILKLLEMSAEPEVLMAEMSPDQLNSFAAYRSRLEVTR
QSDMEKSIEKALQDAGLTEREVTAFMRVRVVGLKRRTYHGKSSQEEGFITIWNPTEKQQN
DLIEGQAYAITGLVPAKSNSETIYLQARGPTTKWQHLSSREVENFEPFFSPRKAISLSNL
GEIPLSSEFDIAAFVLYVGEVYTMANQKRQWIFVTDGSKVEKQAGEYDTSLLAISFFFPP
TDDNSFVPINYNLVGSTVGFCNLIKRAKDQMNHLWVAEATENSNYFLSFDPPHFCHLKEA
ALSTHGWAKVSELIIDELKERVLFIIGGCKN
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtggcagatactccccggcggctgcggcggcggcgattaccggtgggagccg
tgcggcggccactcgggggccgcgctcgagaacgaaccgaatggagctccgaccgagcag
cgtctgcccaattctcgtctcccttcgatgtccgatctcttgcttcaaggacgttcgaag
cttctcgagaatggtgatgctgcttcgcggagcttgccgatgttccggactgggtccggc
aaatcagtggctctgaaacagtcttctgtagccaaagctttgtctgttctgggcgatgaa
gatggtgatgatttccctgatcctggatgttcgaggctattagagaatggtgatgctgct
ttgcaaagcttgccgatgttccagactgggtcgggcaaatcagtggctccgaaacagtct
tctatagccaaagctttgtctgttctgggcgatgaagatggcgatgatttccctgatcct
ggatgttcgaagcttctagagaatggcgatgctgcttcgcggagcttgccgatgttccgg
actgggtcgggcaaatcagtggctctgaaaaagtcttctatagccaaagctttgtctgtt
ctgggcgatgaagatggtgatgatttccctgatcctggacaagcacatgttcgagatttt
aggcctgacagatctagttttcttttccagactgggtctgggaaagtggttagtgcatct
cctacaggtatggaaagagccaagacgttgttggggctggaagaaggtaccgatcaacac
gatttcgcaggcttacgacccacaagaaggccacccattgtcaataacactaataggtgt
caactcgcatcacatttggacagaaaagaaggtttggttcatgctgatgccctgcactct
ttatctgctccgagcatctcatttacttgtggaactagtttagtagaaactaaactgaag
gactctggaaattgtagtaatatgcaaacaaagatgtgtgatataccttctaaaccagct
ccaatcaagttccaaacagctggtgggagatctatatcaatttctggtgatgcccttaaa
cgtgccaggagtcttcttggtgatccagaattgggagacttcttgaatgaggggaacttt
gacagcaggccattttctttcttgaatgagagagagaccggggataattcatcaaacaaa
gaaaatgattcttcgatgtcctttctctgtcaaggaacaccgaagaggaaccatatgccc
aatggtttcataactccattgcgatcatcctctaataaagcgtgttacccaaaagtgttg
gaaaaaccatcgtttggggataacttgatcaacaagtttgatgcagctgtctgtgacagc
acagataggtccaattttgatgtggcttgtctgcagaagcccttaactactaggtcatcc
tctagccctgtaattggcaagtccttggcaaatggaatcggtccagggatgaatccacat
gtaagattgtcaggtggttcactgatggacatctccaacagaattgacatcacttgttca
ggcgctggaaaagttgaaacgaggagactcaaaaaagcaagtttcgtttcccctttcaag
aggccacgaagttctgcattctcatccccattgaaaagtgatcgcttattctcttccagt
ggcttatccacttcattggctaagcaatccctccataaaggaaaggtgtcatctcgatac
ccatctcagattccaagagtatatgtgagtgaatactttgcggggcctccacaagagcag
aacacggtgcagcatattccagaccagttgagaaggattaaaccagataatgcccacaaa
tttgtgtttactaatgaatctggcttgaatggcattggggcagaagccttccttcacatg
ctggtccagtctggagcatctacacagcatatttctaaaggatgggtcacaaatcactat
aggtggattatttggaagcttgcctcttatgagagatattacccagctacaactggaaag
tttcttaccaccacaaatgtgctagaggaactgaagtatagatatgaaagggaaatcaat
catggccaccgttctgcaattaagagaattcttgaaggagatgcctcccccgctgcaatg
cttgtgctgtgtgtttcagctatccatgccgacgacaaccttaagactccaagctcaacc
acaccatcaaatgggacactaaacaacaatgccatgcgattggagctaactgatggctgg
tactctgtagatgcccttttagatgatttgctgtcaaagcatcttatggaaaagaaaatc
tacattggccaaaaaattcgaatctggggagcaagattaggtggctgggctgcacctgtt
tcaccgcttgaggaaacaagaacggttactttattattgcatgcaaatggaacatataga
gctcattgggctgatcgactgggtttttgcaagggtgctggggctccattggcattcaga
tgtatcaagagtaatggaggtccaatccccatgactttagttggagttacacgaatatac
cctattctctacagggagaggttttgtagtggagattccattgtcagatcagagaggatg
gagatgaaaatcaggcagttgtacaatcagaggcgttccttggtcattgaaggtgccgtt
tcagaatttcaacgaagtaccaaagactttcttctttctaatgacagtgatagtgaggag
ggagcaaaaatattgaagttacttgagatgtctgctgaacctgaagttcttatggccgag
atgagtcctgatcagttgaattcttttgctgcttatcgatcgagattggaagtgactagg
caatctgacatggagaaatctattgagaaagctctgcaagatgctggtttaactgaaaga
gaagtcactgcatttatgagggtgagggtggtagggctaaaaagaagaacttaccatgga
aaaagtagtcaagaagagggatttataacaatctggaacccaactgagaagcagcaaaat
gatttaattgaggggcaggcatacgctatcactgggcttgttccagcgaagtccaattca
gaaaccatctacctacaggcaagaggacccactacaaaatggcagcatctatcttctcga
gaagttgaaaatttcgagccattcttcagtccccgcaaagccatttctctatcgaatttg
ggtgaaattccgctttccagtgaattcgatattgctgctttcgttctttacgtgggtgag
gtttacacaatggccaaccaaaaaaggcagtggatctttgtgacagatggttctaaagtt
gagaagcaggctggcgaatatgacacttctttacttgccatcagcttcttcttccctcca
actgatgataattcgtttgtcccaatcaattacaaccttgtgggatcgacggttgggttc
tgtaatcttattaaaagagcaaaagaccaaatgaatcatctctgggtagcagaagcaaca
gaaaattcaaactactttcttagcttcgaccctccccatttttgtcaccttaaagaagct
gccctgtctactcacggatgggcaaaagtctctgagttgataattgatgagctaaaggag
agggtgttatttattattgggggttgcaaaaactag
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