Eucalyptus grandis (rose gum): 104426355
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Entry
104426355 CDS
T03547
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03440
Homologous recombination
egr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104426355
03460 Fanconi anemia pathway
104426355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104426355
03036 Chromosome and associated proteins [BR:
egr03036
]
104426355
03400 DNA repair and recombination proteins [BR:
egr03400
]
104426355
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104426355
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104426355
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104426355
FA (Fanconi anemia) pathway
Downstream FA components
104426355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
104426355
NCBI-ProteinID:
XP_010037673
LinkDB
All DBs
Position
11:39780240..39789447
Genome browser
AA seq
1231 aa
AA seq
DB search
MSAWQILPGGCGGGDYRWEPCGGHSGAALENEPNGAPTEQRLPNSRLPSMSDLLLQGRSK
LLENGDAASRSLPMFRTGSGKSVALKQSSVAKALSVLGDEDGDDFPDPGCSRLLENGDAA
LQSLPMFQTGSGKSVAPKQSSIAKALSVLGDEDGDDFPDPGCSKLLENGDAASRSLPMFR
TGSGKSVALKKSSIAKALSVLGDEDGDDFPDPGQAHVRDFRPDRSSFLFQTGSGKVVSAS
PTGMERAKTLLGLEEGTDQHDFAGLRPTRRPPIVNNTNRCQLASHLDRKEGLVHADALHS
LSAPSISFTCGTSLVETKLKDSGNCSNMQTKMCDIPSKPAPIKFQTAGGRSISISGDALK
RARSLLGDPELGDFLNEGNFDSRPFSFLNERETGDNSSNKENDSSMSFLCQGTPKRNHMP
NGFITPLRSSSNKACYPKVLEKPSFGDNLINKFDAAVCDSTDRSNFDVACLQKPLTTRSS
SSPVIGKSLANGIGPGMNPHVRLSGGSLMDISNRIDITCSGAGKVETRRLKKASFVSPFK
RPRSSAFSSPLKSDRLFSSSGLSTSLAKQSLHKGKVSSRYPSQIPRVYVSEYFAGPPQEQ
NTVQHIPDQLRRIKPDNAHKFVFTNESGLNGIGAEAFLHMLVQSGASTQHISKGWVTNHY
RWIIWKLASYERYYPATTGKFLTTTNVLEELKYRYEREINHGHRSAIKRILEGDASPAAM
LVLCVSAIHADDNLKTPSSTTPSNGTLNNNAMRLELTDGWYSVDALLDDLLSKHLMEKKI
YIGQKIRIWGARLGGWAAPVSPLEETRTVTLLLHANGTYRAHWADRLGFCKGAGAPLAFR
CIKSNGGPIPMTLVGVTRIYPILYRERFCSGDSIVRSERMEMKIRQLYNQRRSLVIEGAV
SEFQRSTKDFLLSNDSDSEEGAKILKLLEMSAEPEVLMAEMSPDQLNSFAAYRSRLEVTR
QSDMEKSIEKALQDAGLTEREVTAFMRVRVVGLKRRTYHGKSSQEEGFITIWNPTEKQQN
DLIEGQAYAITGLVPAKSNSETIYLQARGPTTKWQHLSSREVENFEPFFSPRKAISLSNL
GEIPLSSEFDIAAFVLYVGEVYTMANQKRQWIFVTDGSKVEKQAGEYDTSLLAISFFFPP
TDDNSFVPINYNLVGSTVGFCNLIKRAKDQMNHLWVAEATENSNYFLSFDPPHFCHLKEA
ALSTHGWAKVSELIIDELKERVLFIIGGCKN
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtggcagatactccccggcggctgcggcggcggcgattaccggtgggagccg
tgcggcggccactcgggggccgcgctcgagaacgaaccgaatggagctccgaccgagcag
cgtctgcccaattctcgtctcccttcgatgtccgatctcttgcttcaaggacgttcgaag
cttctcgagaatggtgatgctgcttcgcggagcttgccgatgttccggactgggtccggc
aaatcagtggctctgaaacagtcttctgtagccaaagctttgtctgttctgggcgatgaa
gatggtgatgatttccctgatcctggatgttcgaggctattagagaatggtgatgctgct
ttgcaaagcttgccgatgttccagactgggtcgggcaaatcagtggctccgaaacagtct
tctatagccaaagctttgtctgttctgggcgatgaagatggcgatgatttccctgatcct
ggatgttcgaagcttctagagaatggcgatgctgcttcgcggagcttgccgatgttccgg
actgggtcgggcaaatcagtggctctgaaaaagtcttctatagccaaagctttgtctgtt
ctgggcgatgaagatggtgatgatttccctgatcctggacaagcacatgttcgagatttt
aggcctgacagatctagttttcttttccagactgggtctgggaaagtggttagtgcatct
cctacaggtatggaaagagccaagacgttgttggggctggaagaaggtaccgatcaacac
gatttcgcaggcttacgacccacaagaaggccacccattgtcaataacactaataggtgt
caactcgcatcacatttggacagaaaagaaggtttggttcatgctgatgccctgcactct
ttatctgctccgagcatctcatttacttgtggaactagtttagtagaaactaaactgaag
gactctggaaattgtagtaatatgcaaacaaagatgtgtgatataccttctaaaccagct
ccaatcaagttccaaacagctggtgggagatctatatcaatttctggtgatgcccttaaa
cgtgccaggagtcttcttggtgatccagaattgggagacttcttgaatgaggggaacttt
gacagcaggccattttctttcttgaatgagagagagaccggggataattcatcaaacaaa
gaaaatgattcttcgatgtcctttctctgtcaaggaacaccgaagaggaaccatatgccc
aatggtttcataactccattgcgatcatcctctaataaagcgtgttacccaaaagtgttg
gaaaaaccatcgtttggggataacttgatcaacaagtttgatgcagctgtctgtgacagc
acagataggtccaattttgatgtggcttgtctgcagaagcccttaactactaggtcatcc
tctagccctgtaattggcaagtccttggcaaatggaatcggtccagggatgaatccacat
gtaagattgtcaggtggttcactgatggacatctccaacagaattgacatcacttgttca
ggcgctggaaaagttgaaacgaggagactcaaaaaagcaagtttcgtttcccctttcaag
aggccacgaagttctgcattctcatccccattgaaaagtgatcgcttattctcttccagt
ggcttatccacttcattggctaagcaatccctccataaaggaaaggtgtcatctcgatac
ccatctcagattccaagagtatatgtgagtgaatactttgcggggcctccacaagagcag
aacacggtgcagcatattccagaccagttgagaaggattaaaccagataatgcccacaaa
tttgtgtttactaatgaatctggcttgaatggcattggggcagaagccttccttcacatg
ctggtccagtctggagcatctacacagcatatttctaaaggatgggtcacaaatcactat
aggtggattatttggaagcttgcctcttatgagagatattacccagctacaactggaaag
tttcttaccaccacaaatgtgctagaggaactgaagtatagatatgaaagggaaatcaat
catggccaccgttctgcaattaagagaattcttgaaggagatgcctcccccgctgcaatg
cttgtgctgtgtgtttcagctatccatgccgacgacaaccttaagactccaagctcaacc
acaccatcaaatgggacactaaacaacaatgccatgcgattggagctaactgatggctgg
tactctgtagatgcccttttagatgatttgctgtcaaagcatcttatggaaaagaaaatc
tacattggccaaaaaattcgaatctggggagcaagattaggtggctgggctgcacctgtt
tcaccgcttgaggaaacaagaacggttactttattattgcatgcaaatggaacatataga
gctcattgggctgatcgactgggtttttgcaagggtgctggggctccattggcattcaga
tgtatcaagagtaatggaggtccaatccccatgactttagttggagttacacgaatatac
cctattctctacagggagaggttttgtagtggagattccattgtcagatcagagaggatg
gagatgaaaatcaggcagttgtacaatcagaggcgttccttggtcattgaaggtgccgtt
tcagaatttcaacgaagtaccaaagactttcttctttctaatgacagtgatagtgaggag
ggagcaaaaatattgaagttacttgagatgtctgctgaacctgaagttcttatggccgag
atgagtcctgatcagttgaattcttttgctgcttatcgatcgagattggaagtgactagg
caatctgacatggagaaatctattgagaaagctctgcaagatgctggtttaactgaaaga
gaagtcactgcatttatgagggtgagggtggtagggctaaaaagaagaacttaccatgga
aaaagtagtcaagaagagggatttataacaatctggaacccaactgagaagcagcaaaat
gatttaattgaggggcaggcatacgctatcactgggcttgttccagcgaagtccaattca
gaaaccatctacctacaggcaagaggacccactacaaaatggcagcatctatcttctcga
gaagttgaaaatttcgagccattcttcagtccccgcaaagccatttctctatcgaatttg
ggtgaaattccgctttccagtgaattcgatattgctgctttcgttctttacgtgggtgag
gtttacacaatggccaaccaaaaaaggcagtggatctttgtgacagatggttctaaagtt
gagaagcaggctggcgaatatgacacttctttacttgccatcagcttcttcttccctcca
actgatgataattcgtttgtcccaatcaattacaaccttgtgggatcgacggttgggttc
tgtaatcttattaaaagagcaaaagaccaaatgaatcatctctgggtagcagaagcaaca
gaaaattcaaactactttcttagcttcgaccctccccatttttgtcaccttaaagaagct
gccctgtctactcacggatgggcaaaagtctctgagttgataattgatgagctaaaggag
agggtgttatttattattgggggttgcaaaaactag
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integrated database retrieval system
