Eucalyptus grandis (rose gum): 104426380
Help
Entry
104426380 CDS
T03547
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egr01009
]
104426380
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104426380
Enzymes [BR:
egr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104426380
Protein phosphatases and associated proteins [BR:
egr01009
]
HAD phosphatases
Fcp/Scp phosphatases
104426380
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104426380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
104426380
NCBI-ProteinID:
XP_039160420
LinkDB
All DBs
Position
11:46720456..46735690
Genome browser
AA seq
612 aa
AA seq
DB search
MSRFASKAVVYHGFLRLGELDVVPANGHGFRFPDNEIRIHHISPVSERCPPLAILHTVSS
SSVRCKLESSSPVEQANLNRLHASCLHELKTAVVLLGEEEMHLVAMCSRQKKSLCFWCFS
VPSGLYESSLGLLNLRCLAIVFDLDETLIVANTLKSFEDRIEALRGRIARETDSVRMSGM
SAELKRYVDDRVLLKQYADSNCVVDNGTLYKAQVEEVPQLSDSHEKVVRPVIRLQEKNII
LTRINPKIRDTSVLVRLRPAWDHLKSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEA
RLIDREQVSNRVVCVKSGSRKSLLDVFQDGNCHSKMAMVIDDHSKVWEDRDQPRVHVVPP
FAPYHAPKAETANAILVLCVARNVICNVRGSFFKEFDENLLRKTFELFYEDEVVALPPAP
DVSNYLMSEDSGFVPNGAPNALLANGASGAEFDKRLNFPGEKHAVDVSDIPVRETSDGKS
GTSQPTITIVPYTIGPHASRTLMPSQKAGLFGNPARQDFSFSNHEHDLKGRIPTMKHGLD
NKNHGSSEAALLSRPPMQLTTANMQPHGGCLEEDSNEGHINSGSFGFSQEADSLNLEKEG
SSKSDRSKTLKF
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtttcgcgtccaaggccgtggtgtaccacggctttctccggctgggggagctg
gacgtggtcccggcgaacggccacggcttccggttccccgacaatgagattcggatccac
cacatctccccggtcagcgagaggtgtccccctctcgcgatcctccacacggtgtcctct
tcctcggtccggtgcaagctcgagtcgtcctctccggtcgagcaggcgaatttgaaccgc
ctgcacgcctcttgcttgcacgaactcaagactgctgtagtgttgcttggtgaagaagaa
atgcacttggtggcaatgtgtagtaggcagaagaagtccctgtgcttttggtgcttctca
gttccttcaggtctctacgaatcctctctgggattgctcaatctacggtgccttgcgatt
gtgtttgatcttgatgagacactcattgttgccaacacattgaagtcgtttgaggataga
attgaggctctccgaggccggattgcgagggagactgattcggtgaggatgtcaggaatg
tcagctgaactaaagcggtatgtagatgatagagtgctattgaagcagtatgcagacagc
aattgcgtggtggacaatggaacgctgtacaaggctcaggttgaggaggtccctcagctt
tcagatagccatgagaaagttgttagacctgtaattagattgcaggaaaagaatatcatc
ctcactcgcatcaatcctaagatccgtgacaccagtgtgctagtgagattacgacctgca
tgggaccacttgaagagttacttaacagctaaaggacgtaagaggtttgaagtttatgtg
tgcacgatggctgaaagagactatgctttggagatgtggaggcttcttgaccctgaagca
cgcctaattgatagagagcaagtctcaaaccgtgttgtttgtgtcaaatcaggttcaagg
aaatcattgctagatgtgtttcaggatggtaattgccattccaagatggcaatggtgatt
gatgaccactcaaaggtttgggaagatagggatcaaccacgagtgcatgtagttcctcct
tttgctccatatcatgctcctaaagcggagactgcaaatgccattctggtcctttgtgtg
gcaagaaatgtaatatgcaatgtcaggggttcctttttcaaggagtttgatgaaaactta
ttacgcaaaacctttgaactattttatgaagatgaggtggttgcattaccccctgcccct
gatgtgagcaattacttaatgtcagaggactctggttttgttccaaatggtgctccaaat
gctctacttgccaatggagcgagtggtgcagaatttgataaaagacttaattttccgggt
gaaaagcatgctgttgatgtgtctgatatccctgtaagagaaacttctgacggaaaatct
ggaacatcccagccaaccattacaatagttccatacaccattggtccccatgcttcaagg
acactcatgccatctcagaaagctggtttgtttggtaatcctgccagacaagatttcagc
ttttcgaatcacgaacatgacttgaaagggaggattcccactatgaagcatggtcttgac
aataagaatcacggctctagtgaggccgctctcctgtctagaccaccaatgcagttaact
actgccaatatgcaaccacatggaggatgtcttgaagaagactcaaacgaaggccatata
aactctggaagttttggcttttctcaagaagctgattcactgaacttagaaaaggagggc
tcatcaaaatcagatcggtcaaaaactttgaaattttag
DBGET
integrated database retrieval system
