KEGG   Eucalyptus grandis (rose gum): 104426392
Entry
104426392         CDS       T03547                                 
Name
(RefSeq) LOW QUALITY PROTEIN: flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03030  DNA replication
egr03410  Base excision repair
egr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104426392
   03410 Base excision repair
    104426392
   03450 Non-homologous end-joining
    104426392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:egr03032]
    104426392
   03400 DNA repair and recombination proteins [BR:egr03400]
    104426392
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:egr04147]
    104426392
DNA replication proteins [BR:egr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    104426392
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     104426392
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     104426392
Exosome [BR:egr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104426392
SSDB
Motif
Pfam: XPG_I XPG_N
Other DBs
NCBI-GeneID: 104426392
NCBI-ProteinID: XP_039163267
LinkDB
Position
2:complement(27645985..27650186)
AA seq 239 aa
MGIKGLTKLLADDAPKAMKEQKLESYFGRRIAVDASMSICQLLVVVGRKGTQMLTNEAGE
VTSHLQGMFYQTIRLLEAGIKPVYVFDGPPPDLKKQELAKRFLKRADASEELAVAIVSQN
KEDXEKFSKRTVKVTQQHNEECKRLLRLIGVPVVEATSEAEAQCAARCKAGKVYAIASED
MDSLTFGAPKFLRHLMDPSSRKVPVMEFEISKILEEMNLDMDQFIDLCILSGCDYCESI
NT seq 720 nt   +upstreamnt  +downstreamnt
atgggcatcaagggactgacgaagctgctggcggacgatgccccgaaggcgatgaaggag
cagaagctggagagctacttcggccggaggatcgccgtcgatgccagcatgagcatctgt
cagctcctcgttgtggttgggaggaaggggactcagatgctcaccaacgaggctggtgaa
gtcaccagtcatctgcaaggcatgttttaccagacgattaggctgttggaggcgggcata
aagccagtctacgtatttgatggtccacctcctgatttgaagaagcaagagctggcaaaa
cgttttttgaagagggcagatgcctctgaggagttggcagtagccattgtgtctcaaaac
aaggaagacnnagagaaattcagtaaaagaactgtgaaggtgacgcaacagcacaatgaa
gagtgcaaaagactattaaggcttattggtgtcccagtagttgaggctacttcagaagca
gaggcacaatgtgctgcacgttgcaaagctggaaaggtttatgcgattgcttctgaagac
atggattcccttacttttggagctcctaaatttcttcgccatttaatggatcccagctca
agaaaagttccagtcatggaatttgaaatttccaagatcttggaggagatgaatttggat
atggatcaattcattgacctgtgcattctctctggatgtgattattgtgaaagcatttga

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