KEGG   Eucalyptus grandis (rose gum): 104426693
Entry
104426693         CDS       T03547                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03018  RNA degradation
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104426693
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104426693
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104426693
   03041 Spliceosome [BR:egr03041]
    104426693
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104426693
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104426693
Spliceosome [BR:egr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    104426693
 Complex C
  U2 snRNP components
    104426693
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C DUF1256
Other DBs
NCBI-GeneID: 104426693
NCBI-ProteinID: XP_010038129
UniProt: A0A059A8I3
LinkDB
Position
11:complement(45332842..45334573)
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcctacttcaaggacctggtgggcagggaagtgacggtggagctgaag
aacgatctggccatcagaggcaccctccactccgtcgatcagtacctcaacatcaagctc
gagaacactagggttgtcgatcaggacaagtaccctcacatgctgtcggtcaggaactgc
tttatcagaggatcggtggtgaggtatgttcagctacctcctgatggagttgatattgaa
ttgcttcatgatgccacaagaagagaagccaggggtggttga

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