Eucalyptus grandis (rose gum): 104426725
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Entry
104426725 CDS
T03547
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104426725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104426725
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104426725
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
104426725
NCBI-ProteinID:
XP_010038170
UniProt:
A0A059A849
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Position
11:46360290..46364225
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFIGSDRDRNAVSLVCKSWYEIERWCRRRVFVGNCYAVSPAAVVRR
FPEVRSVELKGKPHFADFNLVPEGWGGYVSPWITTLARAYPWLEEIRLKRMVVTDESLEL
IARSFKNFKVLVLSSCEGFSTDGLAAVAANCRNLRELDLRESEVEDMSGHWLSHFPDSYT
SLVSLNISCLGSEVSFSALERLVSRCPDLRSLRLNRTVPLDRLANLLRRAPQLAELGTGV
YSAELRSDDFSNLVGALAGCRELRSLSGFWDVVPAYLPAVYPLCSGLTSLNLSYATIQSS
ELTKLISQCHSLQRLWVLDYIEDSGLEALAACCKDLRELRVFPSEPFNREGNVSLTEQGL
VSVSEGCSKLQSVLYFCRQMSNAALLTIARNRPNMTRFRLCIIEPRCPDYITHEPLDTGF
GAIVQHCKDLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDERGHP
DSRPESCPVEKLYIYRTVAGPRFDMPDFVWTMDEDSALRPS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaggtgctggagcacgtgttctccttcatcggctccgac
cgggaccgcaatgccgtctccctggtgtgcaagtcgtggtacgagatcgagcgctggtgc
cggcggcgcgtcttcgtcggcaactgctacgccgtcagccccgcggccgtcgtccggcgc
ttcccggaggtgagatccgtcgagctcaagggcaagccccacttcgccgacttcaacctc
gtccccgagggctggggcggctacgtctccccctggatcaccaccctggcccgcgcctac
ccttggctcgaggagattcggctcaagcggatggtggtcaccgacgagagcttggagctg
atcgcccgctcgttcaagaacttcaaggtcctggttttgtcctcttgcgaggggttctcg
accgacgggctcgccgctgttgccgctaattgcaggaacttgagggagcttgacttacgg
gagagtgaagtggaagatatgagtggacattggctcagtcatttccctgattcatataca
tcactcgtatccctcaacatttcctgcttaggctctgaggtaagcttctctgccttggag
cgcctggtgagtcgctgccccgacctgaggtctctccgactcaaccgcaccgtgccactt
gatcgccttgccaatttacttcgacgggccccacagttggctgaattgggcacgggcgtt
tattctgctgaactgaggtctgatgatttctcgaatctagttggtgctctagctggctgc
cgagagctgagaagtctgtctggattttgggatgtggtacctgcatatcttccagctgta
tatcccctatgctcagggcttacatcgttgaacttgagctatgctaccatccaaagctct
gaacttacaaaacttatcagtcaatgtcacagtctgcagcgcttatgggtacttgattat
attgaagacagcggtttggaagccctggctgcatgttgcaaagatttacgggaattgagg
gtgtttccctctgagcccttcaaccgtgaaggaaatgtatctttaacggagcagggcctt
gtgtcagtgtctgagggttgctccaagcttcagtcagttttgtacttctgccgccagatg
tctaatgcggccttacttaccatagctcggaaccgtcctaacatgactcgattccgactt
tgtatcattgaaccacgttgtcctgattatataactcatgagccactcgatacaggcttt
ggagccattgtccaacactgcaaggatctccagcgtctctctctatcaggtcttctaact
gaccgtgtgtttgagtacatagggacttatgcaaagaaacttgagatgctttctgtggca
ttcgctggagacagtgacttgggactgcaccatgtgctatcggggtgcgacagtcttaga
aaattggagatccgggactgcccgtttggtgacaaggcgcttttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgctcagtgagcttcggagcatgtaag
ctgcttggtcagaagatgcccaggcttaatgtcgaagtcattgacgagagaggccacccg
gattcaaggcctgaaagctgcccggtcgagaagctttacatctatagaacggttgcaggt
ccgaggttcgacatgcctgattttgtttggacaatggatgaggattctgctctgaggcct
tcttga
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