Eucalyptus grandis (rose gum): 104426812
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Entry
104426812 CDS
T03547
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104426812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
104426812
03400 DNA repair and recombination proteins [BR:
egr03400
]
104426812
DNA replication proteins [BR:
egr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104426812
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104426812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
RRM_3
Motif
Other DBs
NCBI-GeneID:
104426812
NCBI-ProteinID:
XP_010038278
LinkDB
All DBs
Position
11:49035245..49043063
Genome browser
AA seq
1226 aa
AA seq
DB search
MLESASPSKPFDGVRFVLLGFDPNVRQDVLLKLVDGGGVDAGGYGPNCSHLIVDRIVYDD
PACVAAQKDGKVVVTGLWVDHSYDIGMPVDASSIMYRPLKDLNGIPGAEGLIMCLTGYQR
QDRDDIMTMVGLMGAQFSKPLVANKVTHLICYKFEGEKYELAKKIMTIKLVNHRWLEDCL
RDWEILPEDNYSKSGYELEMVAEAKDSEEEAEEKQPRENAEHRSPSNSKVGISSSSVPLS
AAKSSKAPTGLNEMEGQSTSAKYLSCTPTKVAESLSVRNDLNHLPISISHHVSPLQTATS
GSLTEVKQKTPASSRSKEPCASRSIEASELDAEHSALSYSRKAPRRTSFPPQAVEGSADA
NSSLRIRPRKLDGDIENSSFKAKDRDGVGSTCIYTPSQNLEAHCEESKGTVAQKRPDVSP
SQTSYYEKPCISGSPLTGSKTEGSEVRGLIDHHGGAHDLLYPRNGAHYTNETADVNMVEN
KSICISTNKSNRSNEESAACQLPFANIVNFDMERDKNDDDKITQTSSGGPGKLASISLTA
VGQINVEEPRHQPGEVGKQPWLQPAKISTPTNQAMDVEEPSKPTKCDAPESNGDKNTKTQ
SQKKVAKRKTLGSKTKVSKSADTKGSICPSKAASSTDAKSSSNGRESTVISDKSPGNHSD
MAHAQNGIASLVGAKDIMQAEDGIKDIMDEDTEAPEDKDDCALEEAINKGNPDEYQLIQK
EDVHMEETSNCLVKETNISSDHMPDDATKSKGGSSKEKSLRTYGKTYGLKKPNSRAAIEG
KIIKGTKSSTGKKRKTVPDDNGKPGCNVGLDGGASSLLHEDRRVEEHNGFACSSGTAKPN
RFESSTEVEKENQPVLNADHGISQGKLQNQKASDKSGRMNWQNDEEAKKNCGNSVLAETL
NGRRTEPAWFILSGHRQKRKEFQQVVRRLRGRLCANSHKWSYQATHFISPDPVRRTEKFF
AAAASGRWILKPEYLTASSEAGKFLAEDPYEWHKNGLSQDGAINFEAPRKWRLLRERTGH
GAFYDMRIIIYGECITPPLDTLKRVVKAGDGAILATSPPYDRFLNTRVDFAIISPGMPRV
DVWVQEFLKHEIPCIAADYLVEYVCKPGYSLEKHVLYGTHAWAEKSFSRLQSKAKEVVNL
APPDNGGSDIRCQACGSCDRGEVMLICGDESGSVGCGIGTHIDCCDPPLKAVPEEDWLCP
RCIQSTKKTTKSAPKRKRGTASSRCK
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaagcgcctctccttcgaagcccttcgacggcgtccgcttcgttctgctcggc
ttcgatcccaacgttcgacaagatgttttgttgaagcttgttgatggcggcggggttgac
gcgggtggatacggtccgaattgcagtcatttgatcgttgatagaattgtttacgatgat
cccgcgtgtgtcgctgctcagaaagatggcaaggtagtcgtcactggcttgtgggtcgat
cacagctatgacatcggaatgcctgttgatgcttcatcgattatgtacaggcctctgaaa
gatttgaatggaatacctggtgctgaaggtctaatcatgtgcttaactggttatcaacgg
caagatcgagatgacataatgacaatggttgggttaatgggagcacaattttctaaaccc
ctggtggcaaacaaagttacccaccttatctgctacaagtttgagggggagaagtatgag
cttgccaagaaaataatgacaataaagcttgttaatcatcgttggttagaggattgttta
agggactgggaaattcttccagaagataactatagcaagagtggctatgagttggaaatg
gtggcagaagctaaagattctgaagaagaggctgaagaaaagcaacctagggaaaatgct
gaacataggagtccttctaattcgaaagttgggatctctagctcctctgtgcctttgtct
gcagctaagtcatcaaaagcacccacaggtttaaatgaaatggaaggtcaatcaactagt
gctaagtacttgtcatgtactccaactaaggtggcagaaagcctgtcagtcaggaatgac
cttaatcatcttccaatatccatttctcatcatgtaagtcctttacaaactgcaacttct
ggtagtctaactgaagtgaaacagaaaactcctgcgtcgagcaggagcaaggaaccatgt
gcttccagaagcattgaggcatctgagcttgatgctgagcatagtgctttgagttactca
aggaaagctccaaggagaacctcatttcctccacaagctgtagagggatcagctgatgca
aattcttctctcagaatacgtccacgcaaattagatggtgatattgaaaactcatccttc
aaagccaaagacagggatggcgttggttctacttgtatctacactccttcacaaaatctg
gaggcacactgtgaagagtcaaaaggtacagttgcccaaaagaggcctgacgtttccccg
tcccaaacgagttattatgaaaagccatgcatctcagggagccctttaacaggtagtaaa
actgaaggatccgaggtaagaggattgattgatcatcatgggggagctcatgatctttta
tatccaagaaatggtgcccattatacaaatgaaactgctgatgttaatatggtggagaat
aaatctatatgcatttcaacgaacaagtccaacaggtctaatgaagaatcagcagcatgt
cagttgcctttcgcaaatattgtcaactttgatatggagagagataagaatgatgatgac
aagataactcagacatcttctggtggaccgggaaagcttgcctcaattagcctgactgcc
gttggacaaattaatgttgaagagcctagacatcaaccaggggaagttggcaagcaacct
tggctacaacctgctaagatttcgacccccacaaaccaggcaatggatgttgaagagccc
tctaaacctacaaaatgtgatgcccccgagagtaacggtgataaaaatactaaaacgcag
tcgcagaagaaggtggctaaaagaaagactttgggttctaagaccaaggtcagtaaatct
gcagacacaaaaggctcaatatgcccaagcaaggcagcttcctcaactgatgcaaagagc
tcttcaaatggcagggaaagtacagttatttctgacaaatctcctggcaatcacagtgat
atggctcatgcacaaaatggtattgcatcattggtgggggcgaaggatattatgcaagct
gaggatggcattaaggatattatggatgaggatactgaggcccctgaggacaaggatgat
tgtgctttggaggaagcaataaataaaggaaatcctgatgaatatcagttgatacaaaaa
gaagacgtgcatatggaggagacttcgaattgtttggtgaaggaaacaaatatctctagt
gatcacatgcctgatgatgctactaaatctaaaggaggttcaagcaaagaaaaatcacta
aggacctatggcaaaacttatgggctaaaaaagccaaattcgagggcagcaatagaaggc
aaaattattaaaggaactaaaagttctactggtaagaagcgaaagacagtccctgatgat
aatgggaaaccgggatgcaatgttggcttggatgggggagcgtcatctcttctgcatgag
gaccgaagggtggaagagcacaatggatttgcatgttcttcaggcacagcgaaaccaaac
agatttgagagctccactgaagtagagaaggagaaccaaccagttctgaatgcggaccat
ggtattagtcagggcaaattacaaaatcagaaagcctctgataaatcaggcagaatgaat
tggcaaaatgatgaagaggctaaaaaaaactgtggaaactcagtattagcagaaactctc
aacggaagaagaacggaacctgcgtggtttatactgagtggacataggcaaaagaggaaa
gaatttcaacaagttgttcgacgtctcagagggagattatgtgcaaattcccataaatgg
tcataccaggcaacgcacttcatatctccagatcctgtgcgcaggactgagaagtttttt
gcagctgctgcttctggaaggtggattctgaagcctgaatatctgactgctagtagtgag
gcaggaaagtttctggctgaggacccttatgaatggcacaaaaacggccttagccaagat
ggtgcaattaactttgaggctccaagaaaatggcggctcttaagggagaggacaggacat
ggtgccttctatgacatgcgtataataatttatggcgaatgtatcacaccacctctggac
acactgaagcgtgttgtgaaggctggggatggggctattctagcaacttctccaccttat
gatcggttccttaacaccagagttgacttcgccatcatcagtcctgggatgccacgagtg
gatgtgtgggtccaggaattcctgaagcatgagataccatgcattgcggcagactaccta
gttgagtacgtgtgcaaaccaggatactcactcgagaagcatgtgttgtacggcacacat
gcctgggcagagaagtcgttttcccgactgcagtcaaaggcaaaagaggtggtgaactta
gcaccgccagacaatggtggaagtgatatacgttgccaagcttgtggttcttgtgataga
ggggaggtgatgctcatctgtggtgatgagagcggttcagttggttgtgggataggcact
catattgattgctgtgatcctccactcaaagctgttccagaagaggattggctttgtcca
aggtgtatccaaagtacaaagaaaaccacaaaatctgctccaaaaaggaaacgtggaaca
gcgtcatcaaggtgcaagtga
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