Eucalyptus grandis (rose gum): 104426864
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Entry
104426864 CDS
T03547
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egr03036
]
104426864
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
egr04812
]
104426864
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104426864
Cytoskeleton proteins [BR:
egr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104426864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
Adaptin_N
PDS5
Cnd1
UTP20
HEAT_Maestro
Tti2
INTS1_R4
TPR_TTI1_C
MMS19_C
MMS19_N
HEAT_ECM29
HEAT_DAAF5
TPR_TTI1_N
Dopey_N
Motif
Other DBs
NCBI-GeneID:
104426864
NCBI-ProteinID:
XP_010038338
UniProt:
A0A059A917
LinkDB
All DBs
Position
11:49684473..49702214
Genome browser
AA seq
1435 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQLLEASRKGLSAAEATSLVDCCLDLLRDNNFRVSQG
ALQALASAAVLSGEHLKLHFNALVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWTHKSWRIREEFARTVTSAISLFASTELPLQRAILPPILQMLNDSNHGVREAAI
LCVEEMYAQAGDQFRDELQRHSLPVSMVRDINARLERIEPRNRSSDGLSNKVAAGETKPV
SINHKRSSPRAKNSSRGASLFGAEGDVTEKPIEPIKIYSEKELVLEFEKIASALVPDKDW
SVRIAAMQRVEGLVSGGASDYPCFRGLLKQFVGPLSTQLSDRRSSIVKQACHLLCFLSKE
LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTMLTNCKVARVLPRITDCAKNDRN
AVLRSRCCEYALLILEHWPDAPEIQRSADLYEDLIRCCVGDAMSEVRSIARTCYRMFSRT
WPERSRRLFSSFDPVIQRTIHEEDGGIHRRHASPSVRDRSLQMPSNPHTSAQTNLAGYGP
SAIVAMDRTASLPSGTSLSSGLLLSQTKSLSKGSERTLESVLHSSKQKVTAIESMLRGLD
VSEKHNPSAPRSSSLDLGVDPPSSRDPPLPPAVPASNHLTTSFLGDPISSSTTKGSSRNG
GLNLSDIMTQIQASKDSTKLSYQSGIASEPLSTVSSYLAKRASDRVHERVSIEEKRDSRE
ARRITSAHIDRQYLDTPYRDGDFKDLQSSYIPNFQRPLSRKHVGGRTSANRRSFDDFQIP
VGEMANVVDGPTSLVEALSEGLSSNSDWSARVGAFNYLQSLLQQGPKGIQEVVQNFEKVM
KLFFQHLDDPHHKVAQAALSTLAEVIPACRKPFESYMERILPHVFSRLIDPKELVRQPCS
ATLDVVNKTYGVDSLLPALLRSLDEQRSPKAKLAVIEFAIGSFNKHGINSEGTGNSGILK
LWLAKLTPLAHDKNTKLKEAAINCIISIYNHYDSTALLNFMSSLSIEQQNSLRRALKQYT
PRIEVDLMNFLQNKKERHRPKLTYDPSDTVGSSSEEGYVSMSKKSSLFGRYSAGSADNDG
VMKWSSGQESSIVTPSFPTASKETQDNLHLDFPSSNTRESNYMEELSVQNTGYMPGPVDY
LDHSMNSENMSTPRVHIDGLINSEQVPSGGNVLGNETSGDADINHQKAIGWQSNTLSDSE
PSIPQILHLIGNGNEDNAFCNKHRGLQRLVELSASNDISVWAKYFNQILTIVLEVLDDHD
PTIRELALSLIMEMLKNQKDMMEDSVEIVIEKLLHVTKDTVPKVSNDGENCLTVVLSQYD
PFRCLSVVVPLLVAEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSAD
VRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTAIDINQ
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggccctggagctcgcccgcgccaaggacacgaaggagcggatggccggggtg
gagcgcctccaccagctcctggaggcctcccgcaagggcctctccgccgcggaggccacg
tcgctggtggactgctgcttggatctcctcagggacaacaacttcagggtctcccagggc
gcgctccaggccctggcgtccgccgcggtgctctccggcgagcacctgaagctgcatttc
aatgcgctcgtccccgcggtggtcgagcggctcggcgacggcaaacagccggtcagggac
gctgctaggcggctcctgctcactctgatggaggtctcttctcccacgatcattgtcgaa
agagcaggttcttatgcctggacgcacaaaagttggaggattagagaagagtttgcccga
actgtaacttctgctatcagcctttttgcatctaccgagcttccccttcagcgggcaatt
cttcctcctatattacaaatgttgaatgactcaaatcatggtgttagagaagcagctatt
ttgtgcgttgaggagatgtatgctcaagcgggtgatcaatttcgtgatgaacttcagcga
cattctcttcctgtttccatggtaagagatatcaatgcaagactagagagaattgaaccc
cgaaaccgctcttcagatggacttagcaacaaggttgctgctggagaaacgaagccagtg
agcattaatcacaaaagaagcagtccaagagcaaagaactcctcaaggggagcttctctc
tttggagctgaaggtgatgttacagagaaacccatagaaccaataaagatctattcggag
aaagagctagtattggaatttgagaagattgcctctgctcttgtaccagacaaagactgg
tctgtgcgcattgctgccatgcagcgagttgaagggcttgtttctggaggtgcatcagac
tatccatgtttcaggggacttctgaagcaatttgtgggccctctcagcacgcagttatca
gaccgaaggtctagcatagttaagcaggcttgccatctgttatgctttctatctaaggaa
ctcttaggagattttgaggcttgtgctgagatttttatcccggttctttttaagttagtt
gtgattactgtacttgtgattgcagagtctgcagataactgcataaaaacgatgttaaca
aattgcaaggttgctcgggtacttcctcgtattactgattgtgcaaaaaatgaccgaaat
gcagtacttcgctcaaggtgctgtgaatatgcattgttgatattagaacattggcctgat
gcaccagaaatccagagatcggccgatctatatgaagatcttataagatgttgtgttggc
gatgcaatgagcgaggttcgatcaattgccaggacgtgctatagaatgttttcaagaact
tggccagagcggtctcggcgcttattctcgtcctttgatcctgtcattcaaaggaccatt
catgaagaggatgggggcatacatagaaggcatgcttccccatctgttcgtgatagaagt
ctacagatgccatctaatcctcatacgtctgcccaaacaaatctagcaggatatgggccc
tcggcaattgtggcgatggatagaactgcaagtttaccatccgggacatctctctcttct
gggttgcttctgtcgcaaaccaagtcccttagtaaaggtagcgaacgtactcttgaaagc
gtgttgcactcaagcaagcagaaggtcactgccattgaaagcatgcttagaggtctggat
gtctctgagaagcataatccttctgctcctcggtcatctagtttagatctaggagttgac
cctccatcctctcgcgatccaccacttccgcccgctgttcctgcttccaatcatctcaca
acctcttttcttggagaccccatttcctcaagtaccaccaaaggtagtagtcgtaatggt
ggcttgaatttgtctgatatcatgactcaaattcaggcttcaaaggactccacaaaatta
tcatatcaaagtggcattgcgagtgagcctttgtcaacagtctcctcgtacttggctaag
agagcttctgacagagtacatgaaagagtctccattgaggaaaaaagggattctagagag
gctagacgtattacaagtgcacacattgataggcaatatctagacacgccttaccgagat
ggagactttaaggatttgcagagcagttacatacctaatttccaaaggccattatcaaga
aagcatgtggggggtcggacatctgcaaacaggaggagtttcgatgatttccagatacca
gtgggggagatggccaatgtggtggatggtccaacttctctagttgaagctctaagtgag
ggactcagttcaaattctgactggtcagctcgcgttggggcttttaattatcttcagtcc
ttgttgcaacaaggacccaaaggcattcaagaagttgtgcagaatttcgagaaagtcatg
aagttgtttttccagcacttggatgatccccatcataaagtagcacaggcagctctttcc
actcttgcagaagtcattcctgcttgtcgaaagccctttgaaagttacatggagaggatc
ctcccgcatgttttctcgcggctgattgacccaaaggagttagtcaggcaaccatgttcg
gcaacacttgatgttgtaaacaagacttatggtgtagattctctattacctgctctgctt
cgatcactagatgagcagcggtcgccgaaggcaaagttggctgtgattgaatttgcaatc
ggctcgtttaacaagcatggtataaattctgaaggtaccggtaacagtggtatattgaaa
ctgtggctagctaagttgactccattggcccatgataaaaatacaaagctcaaagaagca
gctattaattgcatcatatccatttacaaccattatgactcgacagcattgcttaatttt
atgtcaagtttgtcaattgaacaacaaaattccttgagacgggcactgaagcagtacact
cctcggattgaagtggacttaatgaacttcttacaaaacaagaaagagcgacatcggcct
aaattgacttatgatccatctgatacagttggttcatcctctgaagaaggttatgttagc
atgtcaaagaagagtagtttgtttggaaggtattctgctggttcagcagacaacgacggt
gtcatgaagtggagttctggtcaagagtcgtctattgttactccaagttttcctacagct
tccaaggaaacacaggataacttacatttagactttcctagttccaacaccagggaatca
aactacatggaggagttaagtgtccagaacacgggctatatgcctggtcccgtggattac
ttggaccatagtatgaactcagaaaatatgtccactccacgtgtgcacattgatggtctt
atcaattcggagcaagtaccttctggaggcaatgttctagggaatgaaacttcaggggat
gcagatattaatcatcaaaaagctattggttggcagagcaacacactatctgactctgaa
cctagcattccccaaattcttcacttgattggcaatggcaacgaagataatgcattttgt
aataagcacagaggacttcaacggttggtcgaattatctgcatctaatgacatatctgtt
tgggcaaagtacttcaatcaaatattgacaattgtgcttgaggtgctagatgatcatgat
cccacaattcgagaacttgctctgtcattaattatggaaatgcttaaaaaccagaaggat
atgatggaagattcagttgagattgtaatagagaagctgcttcatgtgacaaaagatact
gtccccaaggtttcaaatgatggagagaactgcttgacagttgttctgtctcaatatgac
ccattcagatgtttgagtgttgtcgttccattgttggttgcggaagatgagaaaactctt
gttacttgtataaattgtctgacaaagcttgtgggccgtctttcccaagaggaattgatg
gcacaattgccttcatttttgcctgctctttttgaagcatttggaaaccaaagtgcagat
gttcggaagacggttgttttctgtctggtggacatctatatcatgcttggcaaagcattc
ctgccttacttggaaggactcaacagcacacaattgcgcttggtgaccatctatgctaat
cgcatctctcaggcccgaacaggcactgccatagacattaaccaatga
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integrated database retrieval system
