KEGG   Eucalyptus grandis (rose gum): 104426931
Entry
104426931         CDS       T03547                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104426931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:egr03009]
    104426931
Ribosome biogenesis [BR:egr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104426931
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Utp13 WD40_Gbeta WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_Nup120_160 WD_LRWD1 WD40_RFWD3 PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_ACSF4 Beta-prop_NOL10_N Nucleoporin_N Beta-prop_Vps41 Cytochrom_D1 Beta-prop_RIG_1st Nbas_N RAB3GAP2_N
Other DBs
NCBI-GeneID: 104426931
NCBI-ProteinID: XP_039160051
LinkDB
Position
11:complement(155648..163930)
AA seq 888 aa
MAAAAASLPFKKNYRSSQALQQFYAGGPFAVSSDGSFIACNCGDSIKIVDSSNASLRSSI
DCGSDTITALSLSPDGKLLFSAGHSRQIRVWDLSTSTCLRSWKGHDGPVMSMACHVSGGL
LATGGADRKVMVWDVDGGFCTHFFKGHDGVVSIVLFHPDSNRSLLFSGSDDGTIRVWDLL
AKKCASTLRGHDSTVTSLAFSEDGLTLLAAGRDKVVSLWDLHNYACKKTIPMYEVLESVC
VIHSGTVLASQLGLDDQLKVTKESAQNIHFITVGERGILRIWKSEGSVCLFKQEHSDVTV
ISDEDDSRSGFTAAVMLPLDQGLLCVTADQQFLFYYPEKHPEGIFSLTLCRRLVGYNEEI
VDMKFLGEEENFLAVATNLEQVRVYELASMSCSYVLAGHTETVLCLDTCISSSGRTLIVT
GSKDNSVRLWDSESRHCIGVGVGHMGAVGAVAFSRKRQDFFVSGSSDRTLKVWSLDGISE
DGVDSTNLKAKAVVAAHDKDINSVAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVLKGHK
RGIWSVEFSPVDQCVLTASGDKTVKIWAISDGSCLKTFEGHVSSVLRASFLTRGTQFVSC
GADGLVKLWTVRTNECIATYDQHSDKVWALAVGKKTEMLATGGSDAVVNLWYDSTASDKE
DAFRKEEEGVLKGQELENAVSDADYTKAIELALELRRPHKLFELFSELCRMREVGDRVER
ILSALSGEEVCLLLEYIREWNAKPKLCHVAQSVLSQVFRILSPTEIVEIKGIGELLEGLI
PYSQRHFSRIDRLVRSTYLLDYTLTGMSVIEPEADRSAVNDGSPDKSGLEKLEDGLLGEN
VGEEKIQNKEELESSAYKKRKLPRSKDRSKKKSKNVVYADAAAISFRA
NT seq 2667 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggcgtccctgccgttcaagaagaactacaggagctcccaggcgctg
cagcagttctacgccggcggccctttcgccgtctcgtccgacggctccttcatcgcttgc
aactgtggtgactccatcaagatcgtcgattcctccaacgcctccctaaggtcctccatc
gactgcggctccgacaccatcaccgccctctccctcagccccgacggcaagttgctcttc
tccgccggccacagccgccagattagggtttgggacttgtccacctccacctgcctgcgc
tcctggaaggggcatgatggtccggtgatgagcatggcctgccacgtctctgggggtttg
ctggcgacgggaggagctgataggaaagtcatggtgtgggacgtcgacggtggtttctgc
acccatttcttcaaaggtcacgacggcgtcgttagcattgtcctcttccatcccgactcg
aatcgctctcttctgttctctggaagtgatgatggaactatacgggtttgggatctcctg
gcaaagaagtgtgcttcgacactgagaggacatgattcaacagtcacttctctggctttt
tccgaggatggcttgacattgcttgccgctggaagagataaggttgtatctttgtgggac
cttcataattatgcctgcaagaagaccatacctatgtatgaggtgcttgaatctgtatgc
gtgatacatagtggaactgttttggcttcacaactggggttagacgatcagctgaaagtg
acaaaagaaagtgcacagaatattcactttattactgttggtgaacgcggcattttacgg
atatggaaatctgaaggttcagtttgcctgtttaagcaagaacattctgatgtaactgtc
atctcagatgaggacgactcaaggagtggcttcactgctgctgtcatgctacccttggat
caaggattgctatgcgtgacagctgatcaacagtttttattctattatccagagaaacat
cctgaagggatattttcgctgaccctatgtagaagacttgtaggctacaatgaggaaata
gttgatatgaagttcctaggagaggaggaaaatttccttgctgttgctactaatcttgaa
caggtacgggtttatgaacttgcttccatgtcatgttcgtacgtcttggctggtcatact
gaaactgtcctgtgccttgacacttgtatttcaagttctggaaggacgcttattgtcacg
ggaagtaaggacaactctgttaggttgtgggattcagaaagcagacattgcattggagtt
ggagtaggtcacatgggcgctgtaggtgcagttgctttctcaaggaagagacaagatttt
tttgttagtggcagcagcgatcgtacacttaaggtttggagcttggatggcatctcagag
gatggtgtagactcaacaaatttgaaagcaaaagctgttgtggcagctcatgataaagat
attaattctgttgctgttgcaccaaatgacagtttagtttgttctggttctcaggatcgc
acagcttgtgtttggaggcttccagacctggtatctgtagttgtacttaaagggcacaag
agggggatttggtctgtagagttttcaccagttgatcaatgtgtgctcactgcatctggc
gataaaacggtgaagatatgggccatatctgatggttcttgcttaaagacctttgaaggg
catgtctctagtgtactaagagcatcatttctcacccgtgggacgcagtttgtttcttgt
ggtgctgatggcttggtaaaactgtggactgttaggacaaatgaatgcattgctacatat
gatcaacatagcgataaggtatgggctttggctgttggaaagaagactgaaatgcttgct
acaggtggcagtgatgctgttgtaaatctctggtacgattcaactgcttctgacaaagag
gatgcttttcgtaaagaggaagaaggtgttttgaaaggtcaagagttagaaaatgcagta
tctgatgctgactacaccaaggcaatcgaacttgctcttgaacttcggaggcctcataag
ttatttgaattattctccgaactttgcaggatgcgagaagtaggagatcgtgtagagaga
atactttctgctctcagcggcgaagaggtttgtctgcttcttgaatatatccgggagtgg
aatgcgaagccaaaattgtgccacgttgcccaatctgtgctatcacaagtcttcagaatt
ctttctccaacggagatagttgagattaaaggcatcggggagctccttgaaggtctcatt
ccatattctcagaggcatttcagcaggatagacaggcttgttagaagcacgtatttactg
gattacacattgacaggaatgtctgttattgaacctgaagcagacagatcagcagtcaat
gatgggtctccagataaatcaggcctcgagaaactagaggatggtcttttgggagaaaat
gttggtgaggagaaaatccaaaacaaggaggagctggaaagtagtgcatacaagaaaaga
aaattaccgagatctaaagatcgttctaagaagaaatcaaagaatgtcgtgtacgcagat
gcagcagcaatctctttcagagcttga

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