Eucalyptus grandis (rose gum): 104427122
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Entry
104427122 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104427122
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104427122
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104427122
NCBI-ProteinID:
XP_039160955
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Position
11:7801967..7804996
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AA seq
514 aa
AA seq
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MDRFSASRTPVSRSGMIEKIQGPKIWKLAISSINGSSAKGKDQPNSVLFLSSWKVFNVAT
YGAKGDGSSDISQALLSAWKEACASTTPAKVLIPGGTFALTEVALDGPCKXPVEFELQGT
LKAPADPSLFKTDGWVVFQHIDGLTMSGGGTFDGQGKTAWGQNDCDKNTDCRTLPTNLRF
NFVTNALIHDVTTLDSKNFQVNVLGAKNMTFQNFHVNAPADSINTDGIHIGRSDGVNILD
SDIKTGDDCVSLGDGSRQITVKXVTCGPGHGISVGSLGKYENEEPVEGVFVTNCTIIGAD
NGVRIKTWPASKPGTASDMHFEDIQMDNVLNPVILDQGYCPFDQCKAGVPSLIKISKVSF
KKIRGTSASQVAVKVLCSQSVPCQEVEIADIDLVYNGPEGPATSECANVKPVLSGKLNPA
ACAKPNIPTKVKISDVSFRDIRGTSATPLAEKLGCGRGVPCQKLELADINLRYKGRNGAA
TSQCANVKPTITGKSSLPSAWGCEVDRSSYSPGM
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattctccgcaagcaggaccccggtttcgagatctggcatgatagagaaaatc
cagggacccaaaatatggaagttggcaatcagcagtataaatggctccagcgccaagggg
aaagatcaacccaacagcgtcctctttctttcttcttggaaggtctttaacgtcgcgact
tacggtgcaaagggcgatggcagttcagacattagccaggccttgctgagtgcatggaaa
gaggcgtgcgcatccaccactcctgctaaagtgctgatcccggggggaacgttcgcgctg
acggaggttgccctggacggcccctgcaagngccccgtggagttcgagctccaaggcaca
ttgaaggccccagcggacccgagcctcttcaagaccgacggttgggtcgtgttccaacac
attgacggcctcaccatgtcgggcggcgggacctttgacggccagggcaagacagcctgg
gggcagaacgactgcgacaagaacacggactgccgtactctccccaccaatttgaggttc
aacttcgtcaccaatgccttaatccatgacgtaacgacgctcgacagcaagaatttccag
gtaaacgtcttgggcgccaagaacatgacgttccagaatttccacgtgaatgcgccggcc
gacagcatcaacacggacgggatccacattggacggtcggacggggtcaacatcctcgac
agcgacatcaagacaggggacgactgcgtctcccttggtgacgggagccggcagatcact
gtcaagngggtgacctgcggtccgggccacggcatcagcgtcggcagcctcgggaagtat
gaaaacgaagagcccgtggagggtgtcttcgtcacgaactgcaccatcattggtgcggat
aacggtgtgaggatcaagacttggcctgcgtcgaaacccggcacggcttctgacatgcat
ttcgaggatatccagatggacaatgtcctcaaccctgtgatcctagaccagggatactgc
ccatttgaccagtgcaaagcaggggttccttcccttatcaagataagcaaagtcagcttc
aagaaaatcaggggaacctcagcatcccaggtcgcggtgaaggtcttgtgcagccaaagc
gtgccgtgccaagaagtcgagattgcggacatcgacctcgtgtataatggccccgaaggc
cccgccacatcagagtgtgccaacgtcaagcctgtgctctctggcaagctaaaccctgcg
gcttgtgccaagccaaacattcccacaaaggtcaagatctcagatgtgagctttagggac
atccgaggaacgtctgcaacaccacttgctgagaagcttggttgtggaagaggagtgcct
tgccagaaactggagcttgctgatattaacttgaggtataaagggaggaacggggccgcc
acgtcgcagtgcgcgaacgtaaagcctacgatcaccgggaaatcatccctgccctctgcg
tggggttgcgaagttgaccgatcttcatattcaccgggcatgtga
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