KEGG   Eucalyptus grandis (rose gum): 104427348
Entry
104427348         CDS       T03547                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03250  Viral life cycle - HIV-1
egr03272  Virion - Hepatitis viruses
egr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104427348
   03272 Virion - Hepatitis viruses
    104427348
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104427348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:egr04131]
    104427348
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:egr04147]
    104427348
Membrane trafficking [BR:egr04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    104427348
Exosome [BR:egr04147]
 Exosomal proteins
  Proteins found in most exosomes
   104427348
SSDB
Motif
Pfam: UEV Vps23_core Astrin_C RWD DUF6305
Other DBs
NCBI-GeneID: 104427348
NCBI-ProteinID: XP_039162823
LinkDB
Position
2:complement(24741411..24742589)
AA seq 361 aa
MASQSLVQFIEAALWCTGPFELSYTDPDQKWLIRKDMLSLLQGFPNLSPSMDTYIHGDGT
IANLLNAHGTVHISSSSPQVPLTIWLHENYPYVAPIVFVGLTGMVPSPTIHHDHPFVDPS
GLTTSPYIRTWQFPRCNLKELVHNLVKIFSRDHPFSYSATSSPFTHSSVVSKEALDRLEG
MLHYDTTALRSETDKEVEKLLALQQEMDQQVKIVTAIVQGLKRERWELRDRMARLAKEAD
VLINWLKVHDPKRAMAMGDDDIDDVFEGVDEESRLRLQCLAADLSIEDTIYALDKAVDEG
AMNFEIYIRQVRNLAREQFFHRAMFWNESVAMFTFNGIVLFSLEPDSVLDRKLCKNVISD
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcatcccaatctctagtccaattcatagaagcagcgctatggtgcacaggccctttt
gagctatcctacacagaccctgaccagaaatggctcataagaaaagacatgctttcactg
cttcaaggcttccccaacctcagtccgtcaatggacacctacatccacggtgatggcaca
atcgcgaacctcctcaatgcccatggcacggtccatatctccagctcttctccccaagtc
cccctcaccatctggctccatgagaactatccttacgtggccccaatcgtgttcgtgggc
ctgacgggcatggtcccctccccgacgatacaccatgaccaccccttcgtagacccctcg
gggctcaccacgtcgccatatatccgaacctggcaattccctaggtgcaacctcaaggaa
cttgtccacaaccttgtcaagattttctctcgtgaccaccctttttcctattcagccact
tctagccccttcacccactcttccgtcgtctcgaaggaggcactcgatcgccttgagggg
atgcttcactacgataccacggccttgaggtccgagaccgacaaggaggtcgagaagcta
ctggccttgcaacaggaaatggaccagcaggttaagatcgtgacggctatagtccaaggg
ctcaagcgcgagaggtgggaattgagggataggatggcacggttggccaaggaagccgat
gtcttgatcaactggctcaaagtccacgaccccaaacgggccatggccatgggggacgat
gacatagatgatgtgtttgaaggagttgatgaggagtccaggttgaggctccagtgtttg
gctgcagatctgtccatagaggatactatttatgcattggataaagcagttgatgaaggg
gctatgaattttgagatttatattaggcaagttaggaatttggcaagagaacagtttttc
cacagagccatgttttggaatgagtcagttgctatgtttaccttcaacgggatagtttta
ttcagtttagagccagattctgtattggatcggaagctttgtaaaaatgtcatttcagac
tcgtag

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