Eucalyptus grandis (rose gum): 104428012
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Entry
104428012 CDS
T03547
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104428012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104428012
Spliceosome [BR:
egr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104428012
Complex C
U5 SnRNP specific factors
104428012
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Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Nup160
Nbas_N
Gmad1
Motif
Other DBs
NCBI-GeneID:
104428012
NCBI-ProteinID:
XP_039157098
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Position
1:complement(3026041..3029833)
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AA seq
344 aa
AA seq
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MQVAPGENALSVAGPRPMEWSTVPYSAPPQGPMPNGRQRTSSLESPIMLLAGHPSAIYTM
KFNPAGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAILDLQWTTDGSQIISASPDKT
LRAWDVETGKQVKKMVEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPD
KYQITAVSFSDASDKIYTGGIDNDVKVWDIRKGEVTMTLQGHQDTITGMQLSPDGSYLLT
NAMDCKLCIWDMRPYAPQNRCVKIMEGHQHNFEKNLLKCGWSPDGSKVTAGSADRMVYIW
DTTSRRILYKLPGHTGSVNETVFHPTEPIVGSCSSDKQIYLGEI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttgctccaggtgaaaatgctttatcagtggctggtcccagaccaatggaatgg
tctactgttccatacagtgctcctcctcaaggacccatgccaaatgggagacagagaacg
tcaagcttagaatcacctatcatgttattagcaggtcacccgagcgctatctacactatg
aagttcaatcctgctgggacagtcattgcatctgggtctcatgacagagaaatcttctta
tggaacgtgcatggggattgcaaaaactttatggtcttgaaagggcacaagaatgcaatt
ctggatcttcaatggacaacagatggctctcagattatatcggccagtcctgacaaaacc
ctaagagcctgggatgttgaaacgggcaaacaggtaaaaaagatggtagaacattcttca
tttgtcaattcatgctgtccttcacggagagggcctcctctggtggtgagtggatctgat
gacggaactgctaagctttgggacatgcgtcaaagaggtgccatccaaacatttcctgat
aaataccaaatcacggcggtttccttttctgatgcatcagataaaatttatactgggggt
atagacaatgatgtgaaggtatgggacatacgtaaaggtgaagttaccatgacccttcaa
ggccaccaagatacaattacaggtatgcagttgagtcctgatggctcctatctccttact
aatgccatggactgtaagctctgcatttgggatatgcgcccctatgcgccgcaaaaccgc
tgcgtgaagataatggaaggtcatcagcacaactttgagaagaacctactgaagtgcggc
tggtcgcccgatggaagcaaggtcaccgctggcagtgcggatcgcatggtctacatctgg
gacacgacatcccgacggatcctgtacaagctcccgggccacacggggtctgtgaatgag
accgtgttccacccaaccgagcccatcgtcggatcttgcagtagcgacaagcagatatac
ctcggcgagatctga
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