Eucalyptus grandis (rose gum): 104428843
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Entry
104428843 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104428843
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104428843
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104428843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-C3HC4
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Tmemb_9
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104428843
NCBI-ProteinID:
XP_039159900
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All DBs
Position
10:31061601..31066138
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AA seq
298 aa
AA seq
DB search
MREALVGLAFAICCCCSAIGRSSATVVLKPSAFDDLPAKFAVDVGEEGICGALEIADPAD
ACSALRRRGVRLSGNGNGNGNGTDLMRFALIVRGNCSFQDKIVNAQIAGFRAVIVYDDRE
KVDLVYMMVDPKDITIPAVFVSNEAGQSLKEHAQVGTGECCIYETRVETGWTVLAISFIS
LIVIFGILALTLFVPRRLLYWRRKNAYVKHVDDKIVAELPSFAFNSAQSSDKYTREVCAI
CLEDYKDGEILKSLPCQHEFHLGCVESWLKKGGLFCPVCKHDVRTKRACQETQRETGL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgttggtcggcctcgcgttcgccatctgctgctgctgctcggcgatcgga
aggtcgtcggccaccgtcgtcttgaagccctccgccttcgacgaccttcccgccaaattc
gccgtagatgtgggcgaggaggggatatgcggagcgctggagattgccgatcccgcggac
gcttgctccgcgctgcgccgccgcggcgttcgattgagcgggaacgggaacgggaacggg
aacgggaccgatttgatgaggtttgcgttgatcgtgaggggcaattgctcgttccaggac
aagatcgtgaacgcgcagattgccggcttccgcgcggtcattgtttacgatgaccgcgag
aaggtcgatttggtgtacatgatggttgatcccaaggatatcacgattcctgcagttttc
gtttcgaatgaagccggtcaaagtctaaaggagcatgcccaagttggaactggggaatgc
tgcatttatgaaactcgtgtcgaaacaggctggacagtgctggctatatctttcatctcc
cttattgtaatatttggcatattggctttgaccttgtttgttccaagacgattgctgtac
tggcgaaggaagaacgcatatgtaaaacatgtagatgataaaatcgtggcagaacttccc
agctttgccttcaattctgctcaaagtagtgacaagtacactagggaagtttgtgccatc
tgtctcgaggattacaaagatggagagatccttaaatcccttccttgccaacacgaattt
catttgggctgtgtggagtcttggctgaagaagggaggattgttctgccctgtgtgcaag
catgatgtgaggaccaagagagcatgtcaagagacacagcgagaaaccgggctttag
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