Eucalyptus grandis (rose gum): 104429276
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Entry
104429276 CDS
T03547
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
104429276
03400 DNA repair and recombination proteins [BR:
egr03400
]
104429276
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104429276
DNA replication proteins [BR:
egr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104429276
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104429276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
UBA_7
UBA
ResIII
UBA_9
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
104429276
NCBI-ProteinID:
XP_039155107
LinkDB
All DBs
Position
8:complement(62892131..62899710)
Genome browser
AA seq
877 aa
AA seq
DB search
MNGEAVDGDAAVAKLVEMGFEYSSAVEAVKVVGASIDDAVEYILNGPSRTNLGASTSSNC
SKVCVKASGKRASSLSQPSGKMQQSNILDHFGTKMQTKRSKFNVAKDALNAGSKVSPVME
GNGNVHPDMHRDTKIKSEIIAVDCPVELRLGADWEQQVSSLLRKHFGHASLKSFQREALA
AWLSNQDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLAKHGVSACFL
GSGQPDNSVEKKAMEGKYGLIYVCPETVLRLIKPLQSLAAGRGIALFAIDEVHCVSKWGH
DFRPDYRKLSVLRENFSTSKMKFLKFDIPLMALTATATNRVREDVIRCLCMSKETKIVLT
SFYRSNLRFSVKHSRTSSRTYKKDFHVLIKTYGLRRKIGDNQHLDCAEDSDNTSVCSEDD
YCDRYEDDEANLVKNDNTSSRETGLSVEFLEDETDTFQGVDDWDVPCGEFHGESPDLSQE
VCSSFEMSDSPMELEERLKLQQEPLDHGPTIIYVPTRKETVTIAKFLCDFGIKAAAYNAK
LSKSYLRQVHKEFHEDNVEVVVATMAFGMGIDKLNVRRIIHYGLPQSLEAYYQEAGRAGR
DGKLADCILFANLARTPTLLPSKRSENQLKLAYTMLSDCHRYGMNTANCRARSLVEYFGE
HFSHEKCYLCDVCIKGPPEMLDVREEADIFMQVLAAHKKQYALSRGNSGYIADSYDDDIT
RRDVKQRQYVEKLYLKLLVSKIREQSPKYMAIDMLWWQGLARVMESKGYIKEGDEKAHVQ
IKYPELTERGWDFVQSQREESLYIFPEADMLLAGRKRRSFSTFSEWGKGWADPEIRRQRL
GRRRSNRKPRERKSKGFKASQKTVRGRLSKLLKLKSK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgaagctgtcgatggtgatgccgctgttgcaaaacttgttgaaatgggattt
gaatattcttcagcagtagaggctgtgaaagtggttggtgcttcaatagatgatgcggtt
gagtatatcctcaatggcccttcgagaaccaatttgggtgcatcaacaagttctaactgt
tccaaagtttgtgtaaaagcttcaggcaaaagagcttcgtccctgtcacaaccctcaggg
aaaatgcagcaatctaacattctggatcattttggtacaaaaatgcaaaccaaaagaagt
aaatttaatgtggcaaaagatgctttgaatgcggggtcaaaagtctcacctgtcatggaa
ggaaacgggaacgtccatcctgatatgcatcgagacaccaagatcaaatcagaaattatt
gctgttgattgcccagtagagctgcgtctgggagcagactgggagcagcaagttagtagt
ctcttacggaagcactttggtcatgcatccttgaagagtttccagagagaagctttggct
gcttggctatctaaccaagattgccttgttctcgctgcaacaggatctggtaaatcactg
tgtttccagattccagccctactgactgggaaggtggttgttgtgatctcaccattgata
agtttaatgcatgaccagtgtctaaagctcgcaaaacatggtgtctctgcctgctttctt
ggatctgggcaacctgacaatagtgtggaaaagaaagcgatggagggaaaatatggtttg
atatatgtttgcccagagacggttttaaggctgataaagccactacaaagtcttgcagca
ggccgaggaatcgcattatttgcaattgatgaagtccactgtgtttcgaaatggggccat
gattttcggcctgactacaggaaactatctgtgttaagagagaacttcagcacttccaag
atgaagttcttgaaatttgacatcccactgatggctttgactgctactgctactaaccgt
gttcgagaagatgttattcggtgcctttgcatgtcaaaggagacaaagattgtgcttaca
tcattctaccgctccaatctacgtttttccgttaagcatagcagaacttcttcacggact
tacaaaaaggatttccatgttttgataaaaacatatggtttgagaagaaagatcggtgac
aaccagcatctcgactgtgctgaagattccgataatacatcagtatgttcagaggacgat
tactgtgacagatatgaagatgatgaagcgaatttggtgaaaaatgataacacttcttca
agggagacaggattgtcagttgaattcttagaagatgaaacggacaccttccagggtgtg
gatgattgggatgttccctgtggagaattccatggagaatctcctgatttaagccaggag
gtatgcagttcttttgagatgtctgattcaccaatggaactggaggaaaggctgaagctt
cagcaagagccattagatcatggacctactattatttatgtccctacgaggaaagaaact
gtgacaattgccaaattcttgtgtgacttcggcatcaaagcagcagcttataatgccaag
ttgtcaaaatcatatcttaggcaagtccacaaggaatttcatgaggacaacgtagaggtt
gttgttgcgactatggcttttggaatggggatcgacaagttaaatgtcagaagaatcatc
cactatggtttgccacagagtttagaagcatactatcaagaagcagggcgtgctggaagg
gatggaaaattagcagattgcatactctttgctaatttagcaagaacaccaactctgttg
cctagtaaaaggagtgaaaatcagttgaaactagcgtacacaatgctgtctgattgtcac
agatatggaatgaacactgcaaactgtcgagctagatcactcgttgagtactttggggag
cacttcagtcacgagaagtgctacttgtgcgatgtgtgcattaaaggacctcctgagatg
ctggatgtgagggaagaggctgatattttcatgcaggttctcgctgctcacaagaaacaa
tatgctttgtctcggggaaacagtggatacattgccgactcatatgacgatgatataaca
cgtcgtgacgtcaaacaaagacagtatgttgagaagctatatctcaagctcttggtcagt
aaaatcagggagcagtctcctaagtacatggcaattgacatgttatggtggcaaggtctt
gctcgagttatggaaagtaaaggatacatcaaagagggtgatgagaaggctcatgttcag
atcaaatatcccgagctaacagaaagaggatgggattttgtgcaatcacaaagagaggaa
agcttgtacatatttcctgaagctgatatgcttctcgcggggagaaaacggagatcattt
tccactttttctgaatggggtaagggctgggctgatcctgagatacgtcgccagcggttg
gggaggaggcgatcaaacaggaagccaagagaaaggaaatcaaaaggttttaaggccagt
cagaaaactgttcgaggaaggctatctaaattattaaaactaaaatcaaagtga
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