KEGG   Eucalyptus grandis (rose gum): 104429566
Entry
104429566         CDS       T03547                                 
Name
(RefSeq) LOW QUALITY PROTEIN: SART-1 family protein DOT2-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104429566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egr03041]
    104429566
   04121 Ubiquitin system [BR:egr04121]
    104429566
Spliceosome [BR:egr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    104429566
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    104429566
Ubiquitin system [BR:egr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104429566
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 104429566
NCBI-ProteinID: XP_039159227
LinkDB
Position
10:complement(37542743..37548864)
AA seq 855 aa
MELEESPYREKRGVGDGDSEEIGGHKSRESSKHRNKDRKKRGHQEEKDQGNKVKGKEAKD
DRLSSRDRRKDDRDEREKDRRKEDGEEYEKDRSRITKGREKERDYEQRDKRRDQEKEREQ
EREHEREKDRKDRRKDREVEKESDDKEKGKEKSSREKEREREKEKPKEKEREKYRDKWRE
KEKDRMTDEAKEKSNRKRDREEDHNRDGSRDKERVIRKGDARDYDRIKDNRVEFDIAEEK
EDVGHGQDPDSASDGTRLSTSKLQDRISKAKEGRLKRQPESEGASEMLAWVNRSRKLEHK
RNEEKEKVLQLSKVFEEQDDIGHGESEDEQEVPRNAHDLVGVKVLHGLDKVIEGGAVVLT
LKDQNILANGDINEEVDMLENAEIGEQKQRDEAYKAAKKKTGIYDDKFSDDPASEKKMLP
QYDDPAQDEGVTLNSSGHLTNEAEKKLEELRRRLQGASSSSHYEDLTSSAKTSSNYYTQE
EMLRFRKPKKKKSSWRKEKLDLDALEAEAVSAGLAAGDLGSRKDGRRQASREEQEKIEAE
MRKNAFQLAYAKAEEASRLLRVEQTLPVKTENDENMVIADDDEDLYKSLEXARKLALKKQ
EEKGASGPKAIALRASSIPSTHNAENQSVTTGESQESRVVMTEIEGFVSGLEVDEVSRKP
DTEDVFMDEDEAPVTSGNEVKDEPGGWTEFKEFGNDEGPVNEDKEEVVPDETIHEAAVGK
GLSGALKLLKERGTLKETVDERGGRNMDKKKSKLVGIADDGQKEIHIERRDEFGRILTAK
EDFRLLSHKFHGKGPGKRKQEKRIKQYQEELKLKQMKNSDTPSXVAERMREAQAQMETPY
LVLSGHVKPGYVFLC
NT seq 2568 nt   +upstreamnt  +downstreamnt
atggaattggaggaatctccctacagagagaagcgaggtgtgggagacggtgattctgag
gaaattggtgggcataagtctagagaatcgagtaagcataggaataaggatcggaaaaag
agaggtcaccaagaagagaaggatcaagggaacaaagtaaaaggtaaagaagcaaaagac
gatagactctcaagcagggatcggaggaaggatgatagagatgagcgtgagaaggatagg
aggaaggaagatggagaggagtacgagaaggataggagcaggattactaagggcagagag
aaagaaagagattatgaacagcgtgacaaacgtagagaccaggagaaggagcgggagcag
gagcgagaacacgagagggaaaaagatcgaaaggatagacggaaggatcgtgaggtagaa
aaggagagtgatgacaaagagaaggggaaggagaagagtagcagggagaaagaaagagaa
agggaaaaggagaagccaaaggagaaagagagagaaaaatatagagacaaatggagagaa
aaggagaaggacaggatgacagatgaagcaaaggagaagagcaataggaagagggatagg
gaggaagatcacaacagagacgggtcaagagataaagaaagggtaatcaggaagggggat
gcacgcgattatgataggatcaaggataatagagtggaatttgacattgctgaagaaaag
gaagatgttgggcatgggcaagatcccgatagtgcttcggatggaactaggttgtccacc
tccaaactacaagaccgcatctcaaaagcaaaagaagggagactgaaaagacagcccgag
tctgagggtgcttctgagatgttggcatgggttaataggagtcgtaagcttgaacacaaa
aggaatgaagaaaaggagaaagtcctgcagctatcaaaagtatttgaggagcaggatgat
attggtcatggagagagcgaagatgagcaggaagttcccagaaatgctcatgatctagtg
ggggtgaaagtacttcacggacttgataaggttattgaaggtggggcagttgttttgaca
ctcaaagatcagaacatacttgcaaatggagacatcaatgaagaagttgatatgcttgag
aatgcggaaattggagagcagaaacagagggatgaagcttacaaagctgccaagaagaaa
actggaatctatgatgacaaattcagtgatgaccctgcatcggagaagaaaatgcttcca
caatatgacgacccggctcaagatgagggggtcactctcaactcgagtggacatttgacc
aatgaagctgaaaagaaattggaagagctaagaaggaggctacagggtgcttcttcaagt
agtcattatgaagatctcacctcatctgccaagacctcgtccaattattacactcaagaa
gaaatgcttcgattcagaaagcccaagaaaaagaaatcgtcatggaggaaagaaaagttg
gacttagatgcccttgaagcggaagcagtttcggcagggctggctgctggagatcttgga
tcacgtaaggatgggaggaggcaggctagcagagaggaacaagagaaaatcgaggctgag
atgagaaagaatgccttccaattggcctatgctaaagcagaggaggcatctaggttactg
cgggtggagcaaactcttcctgttaagacggagaatgacgaaaacatggtcattgctgac
gacgatgaagatctttataaatctttagagnnagctaggaaattggctctaaagaagcaa
gaagagaagggggcttctggtcctaaagcgatagctcttcgtgccagtagtattcccagc
acacacaatgcagaaaatcagagtgtcacgactggagaatcacaggaaagcagggttgtc
atgacagaaatagaaggttttgtttcaggcctcgaggttgatgaagtttctcgtaagcct
gacacagaagatgtcttcatggatgaagacgaagcaccagtaacatccggtaatgaagta
aaagatgagcccggaggctggacagaatttaaagaatttggtaatgatgaaggtccagtt
aatgaggataaggaggaagttgttccggatgagacaattcatgaagctgcagtggggaaa
gggctgtcaggtgctttaaagctgctcaaggaacggggaacacttaaagaaactgttgat
gagcggggtggtagaaacatggataagaagaaaagcaagctcgtaggcattgcagatgat
ggacagaaagagatccacattgaaaggagggatgaatttggccgaatattaactgcaaaa
gaagatttccgattgctttcccataaatttcatggaaaagggcctggcaaaaggaagcaa
gagaagcgcataaagcaataccaggaagaattgaagttgaagcagatgaagaattcagac
acgccttctnttgttgcagagaggatgagggaagctcaagctcaaatggagacaccttat
cttgtgcttagtggtcatgttaagcctgggtatgttttcctgtgttga

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