Eucalyptus grandis (rose gum): 104430143
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Entry
104430143 CDS
T03547
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104430143
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104430143
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
ProQ_C
Motif
Other DBs
NCBI-GeneID:
104430143
NCBI-ProteinID:
XP_010041204
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Position
1:complement(4256988..4259480)
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AA seq
401 aa
AA seq
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MSSHSTLGVASLLFTVLYIAMISSQAAIAVSAAKYNVVSLGAKPDGVTDSTKAFVGTWLA
ACGSEMPATISVPPGRFLVGGATFNGPCKNNAIRWQIEGVIKAPADYNVLGNVGTWLLFQ
HVDGMSISGGVLDGQGAALWACKASGKSCPGGATTIVFSDSRNIAVSKLTSLNSQLFHIV
INGCQNVRLQGMKVFASGDSPNTDGIHVQLSSGVTIMNSKIGTGDDCVSVGAGTTNLWIE
NVACGPGHGISIGSLGKELEEAGVENVTVKNVVFRGTQNGLRIKSWGRPSTGFAKNILFQ
HAVMSNVNNPIVIDQNYCPNNINCPGQFSGVKISDVTYQDIHGTSATEVAVKFDCSLKNP
CAGIRLEDVKLTYKSNQQPAQASCVNAGGLAFGLVQPSSCL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccatagcactcttggtgtggcctcacttctcttcacggtgctctacattgcc
atgatcagctcacaagcagcaattgccgtgagcgcagccaagtacaacgtcgtctctctc
ggggccaagcctgatggggtcacggactcgacaaaggccttcgtgggcacatggctcgca
gcttgtggctccgagatgccggccaccatcagcgtgccacccgggcggttcctggtggga
ggggccaccttcaacgggccgtgcaagaacaacgccatccggtggcagatcgaaggggtg
atcaaggctcccgcggattataatgttcttgggaatgttgggacgtggctcttgttccag
cacgtggacggcatgtcaatctccggcggggtcctcgatgggcaaggcgccgctttgtgg
gcttgcaaagcgtccggcaagagttgccccggtggagccacgacaattgtcttcagcgac
tcaaggaatattgcggtaagcaaactgacgtcgctcaatagtcagttgtttcacattgtc
atcaacggatgccaaaacgtgaggttacaaggaatgaaggtttttgcgtccggtgacagc
ccgaacacggatggtattcatgtccaattatcttccggtgtcacgatcatgaactcaaaa
atcggaactggtgatgactgcgtctcagtcggtgccggcactacaaacctctggatcgaa
aacgttgcttgtggcccgggccacggaatcagcattgggagcctagggaaggaacttgaa
gaggcaggagttgagaacgtgacggtcaagaacgttgtgttccgagggacacaaaacggg
ttgaggatcaaatcttggggcagacccagcaccggatttgccaagaacatcctcttccaa
catgccgtcatgtccaacgttaataacccaattgtcatcgaccaaaattactgtcccaac
aacatcaattgtcctggtcagttttcaggagtaaaaattagcgacgtgacataccaagac
attcacgggacatcagcgaccgaagtggctgtcaaatttgactgcagtctgaagaaccca
tgcgcaggaataagattagaagatgtgaagctcacctacaagagcaatcaacaaccggct
caagcttcctgcgtcaatgctggtggattggcctttggcctggtccaaccctccagttgc
ttatag
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