Eucalyptus grandis (rose gum): 104430940
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Entry
104430940 CDS
T03547
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104430940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104430940
Spliceosome [BR:
egr03041
]
Common components
Common spliceosomal components
SR proteins
104430940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
104430940
NCBI-ProteinID:
XP_039170162
LinkDB
All DBs
Position
6:4992081..4996684
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AA seq
228 aa
AA seq
DB search
VLAFSLFCSRSRTPLEAGPAGAPPKHLCLSRRRRRRRRRGSSIFSLLILNISFRSSLLPP
ASTPFGSAAINASRGCFARTTADDLFPLFDKYGKVVDLFIPRDWRYVFFLFSVEFLCCRV
LMWPRGTGESRGFAFVRYKYADEAQKAVDKLDGRVVDGREIGVQFAKYGPNVERINKGRI
AELVSKIRRQSRSRSPRPRYRDEYRDRDCRRNCSRSREQYDHDRYRDR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gttctcgcgttctctctcttctgctctcgaagtcgaacccccttggaagctggaccagct
ggagccccaccgaagcatctctgtctctctcgccggagaagaaggagaaggagaagaggt
agcagcatcttctcgctcctcatcctcaacatctccttccgtagctctctccttccccct
gcttcgactcccttcggctccgccgctatcaatgcctcacgcggttgtttcgcaaggacc
accgccgacgacctcttccctctcttcgacaagtacggcaaggtcgtcgacttgttcatt
cccagggactggaggtacgtgtttttcctcttctccgttgaatttctttgttgccgtgtt
ctgatgtggccacgcgggactggggagtcgagaggattcgcattcgtgaggtacaagtac
gcggatgaggcgcagaaggcggtggacaagctcgatgggagagtcgtggacgggagagag
attggggttcagttcgccaagtacggtcccaatgtggagagaatcaataaggggaggatt
gccgaactggtttcaaagataagaaggcagtcaagaagtcgtagtcctcgtccaaggtac
agagatgaatatagagaccgtgattgcaggagaaattgcagtagaagcagggaacaatat
gatcacgacaggtacagagacaggtaa
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