Eucalyptus grandis (rose gum): 104432027
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Entry
104432027 CDS
T03547
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03082
ATP-dependent chromatin remodeling
egr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104432027
03083 Polycomb repressive complex
104432027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egr03036
]
104432027
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104432027
Histone modification proteins
HAT complexes
HATB complex
104432027
HDAC complexes
Sin3A-HDAC complex
104432027
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104432027
PRC2.2
104432027
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104432027
Heterochromatin formation proteins
Other heterochromatin formation proteins
104432027
Chromatin remodeling factors
NuRD complex
104432027
NuRF complex
104432027
NuRF complex (fruit fly)
104432027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
104432027
NCBI-ProteinID:
XP_039159335
LinkDB
All DBs
Position
10:35423079..35430085
Genome browser
AA seq
467 aa
AA seq
DB search
MKERGKGAGRSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVIANVEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGASTSRPDLILTGHKDNAEFALAMSPTE
PFVLSGGKDRYVVLWSIQDHISTLAADPGSAKSPGSAGTNNKQSSKAAGGNDKTGDSPSI
EPRGVYLGHGDTVEDVTFCPSSAQEFCSVGDDSCLILWDARTGSSPAIKVEKAHHADLHC
VDWNPHDVNLILTGSADNTVRMFDRRNLTSGGVGSPVHTFEGHNAAVLCVQWSPDKSSVF
GSSAEDGILNIWDHEKIGRKIETVGSKVPNSPPGLFFRHAGHRDKVVDFHWNSSDPWTIV
SVSDDGESTGGGGTLQIWRMIDLIYRPEEEVLAELDKFKSHILSCTS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagagggaagggggcggggagatcggtggacgagaggtacacccagtggaag
tcgctcgtccccgtcctctacgactggctcgccaaccacaacctcgtctggccctccctc
tcctgcagatggggtccacagctcgagcaagctacttacaaaaatcgacagcgtctttac
ctatctgaacagacagatggcagtgttccaaatacacttgttattgcaaatgtcgaggtt
gtcaaaccaagagttgcagctgcagagcatatctctcagtttaatgaagaagctcgctct
ccctttgtcaagaagttcaaaactattatacatcctggggaggtaaacaggatcagggag
ctgccccaaaacagtaagatagtagcaactcacaccgatagccctgatgtcctcatctgg
gatgttgagacccagcctaatcgccatgctgttttaggtgcttcaacttcacgtccagat
ctgatactcaccgggcataaagataatgctgagtttgctcttgcaatgtccccaaccgaa
cctttcgttctttctggaggtaaagacagatatgtagttttatggagcattcaagatcat
atctcaactttggctgcagatcctgggtctgcaaaatctccagggtctgctggaaccaac
aataagcagtcttctaaggctgctggtggcaatgataagactggggacagcccttcaatt
gaacctcgtggagtctacctggggcatggcgacactgttgaggatgtgactttctgcccg
tcgagtgcacaggagttctgtagtgtgggggatgattcttgtctcatcctatgggatgca
agaactggctcttctccagctatcaaggttgagaaagctcatcatgctgatctccattgt
gttgattggaatcctcatgatgtaaacctgattctaaccgggtcagctgataatacagtt
cgcatgtttgaccgccgaaacctcacttcggggggagttggatcacctgtccatactttt
gagggtcacaatgctgctgtgctctgcgtacagtggtctccagacaagtcatctgtcttt
ggaagttctgctgaggatggcattttaaatatctgggatcatgaaaagattggtagaaag
atagagaccgtgggttcaaaagtacccaattctcctccagggttattcttccgtcatgct
gggcacagggacaaggttgttgacttccattggaattcatccgatccctggacaattgtt
agtgtttctgatgatggtgaaagtactggtggaggtggtacactgcagatatggcggatg
atcgatttgatttacagacctgaggaagaagttctggctgagctggacaaattcaagtct
cacattctctcttgcacctcttga
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