Eucalyptus grandis (rose gum): 104432755
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Entry
104432755 CDS
T03547
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
egr03015
mRNA surveillance pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104432755
09122 Translation
03013 Nucleocytoplasmic transport
104432755
03015 mRNA surveillance pathway
104432755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104432755
03041 Spliceosome [BR:
egr03041
]
104432755
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104432755
TREX complex
104432755
Spliceosome [BR:
egr03041
]
Complex C
Other components
EJC/TREX
104432755
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104432755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
104432755
NCBI-ProteinID:
XP_010043580
UniProt:
A0A059D538
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All DBs
Position
2:complement(39431888..39434973)
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AA seq
252 aa
AA seq
DB search
MSSALDMSLDDIIKSNKKSGSGAPRSGGGRGRGGGGAASGPGPTRRPPNRAAARANPYAA
PKAPETTWQHDMFADQGLAFQGQPGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDL
KRHAVHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATP
VISNGSFGNLNGFPRGGQARGGAIGRPRGGASGSGRRPAARGRGRGRGRSEKVSAEDLDA
DLEKYHSEAMET
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgccctcgacatgtctcttgatgacatcatcaagagcaacaaaaagtccgga
tccggcgcccccagaagcggaggcggccgcggccgcggcggcggcggtgccgcctccggg
cccggccccacccgccgccctccgaaccgcgccgccgcccgcgcgaacccgtacgccgcc
ccgaaggcgccggagacgacgtggcagcacgacatgttcgcggatcagggactggcgttc
caggggcaacccggccgggcctccgccatagagactggaacgaagctgtatatatctaac
ctggattatggcgtctcgaacgaagatatcaaggaactattctccgaggttggtgaccta
aaacgtcatgcggtacattacgataggagtggaagatccaagggaacggctgaagttgtt
ttttcacgccgtactgatgccttggcagctgttaagagatacaacaatgttcagcttgat
ggaaagccgatgaaaatagagattgtgggaacaaacattgcgactcctgctgctactcct
gtcatttcaaatggttctttcggaaacctgaatggatttccaagagggggacaagctagg
ggaggtgctattggacgaccacgcggtggtgccagtggcagtggccgtaggcctgctgca
aggggtcgtggacggggaagaggtcgcagcgagaaagtatcagctgaagatcttgacgcc
gatttagagaagtaccattcggaagcaatggagacttga
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integrated database retrieval system