KEGG   Eucalyptus grandis (rose gum): 104432755
Entry
104432755         CDS       T03547                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03013  Nucleocytoplasmic transport
egr03015  mRNA surveillance pathway
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104432755
  09122 Translation
   03013 Nucleocytoplasmic transport
    104432755
   03015 mRNA surveillance pathway
    104432755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104432755
   03041 Spliceosome [BR:egr03041]
    104432755
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104432755
    TREX complex
     104432755
Spliceosome [BR:egr03041]
 Complex C
  Other components
   EJC/TREX
    104432755
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104432755
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 104432755
NCBI-ProteinID: XP_010043580
UniProt: A0A059D538
LinkDB
Position
2:complement(39431888..39434973)
AA seq 252 aa
MSSALDMSLDDIIKSNKKSGSGAPRSGGGRGRGGGGAASGPGPTRRPPNRAAARANPYAA
PKAPETTWQHDMFADQGLAFQGQPGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDL
KRHAVHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATP
VISNGSFGNLNGFPRGGQARGGAIGRPRGGASGSGRRPAARGRGRGRGRSEKVSAEDLDA
DLEKYHSEAMET
NT seq 759 nt   +upstreamnt  +downstreamnt
atgtccagcgccctcgacatgtctcttgatgacatcatcaagagcaacaaaaagtccgga
tccggcgcccccagaagcggaggcggccgcggccgcggcggcggcggtgccgcctccggg
cccggccccacccgccgccctccgaaccgcgccgccgcccgcgcgaacccgtacgccgcc
ccgaaggcgccggagacgacgtggcagcacgacatgttcgcggatcagggactggcgttc
caggggcaacccggccgggcctccgccatagagactggaacgaagctgtatatatctaac
ctggattatggcgtctcgaacgaagatatcaaggaactattctccgaggttggtgaccta
aaacgtcatgcggtacattacgataggagtggaagatccaagggaacggctgaagttgtt
ttttcacgccgtactgatgccttggcagctgttaagagatacaacaatgttcagcttgat
ggaaagccgatgaaaatagagattgtgggaacaaacattgcgactcctgctgctactcct
gtcatttcaaatggttctttcggaaacctgaatggatttccaagagggggacaagctagg
ggaggtgctattggacgaccacgcggtggtgccagtggcagtggccgtaggcctgctgca
aggggtcgtggacggggaagaggtcgcagcgagaaagtatcagctgaagatcttgacgcc
gatttagagaagtaccattcggaagcaatggagacttga

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