Eucalyptus grandis (rose gum): 104433139 Help Entry 104433139         CDS       T03547                                  Name (RefSeq) symplekin   KO K06100   symplekin Organism egr  Eucalyptus grandis (rose gum) Pathway egr03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:egr00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     104433139  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:egr03021]     104433139    03019 Messenger RNA biogenesis [BR:egr03019]     104433139 Transcription machinery [BR:egr03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      104433139 Messenger RNA biogenesis [BR:egr03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      104433139     U7-dependent histone pre-mRNA processing factors      104433139 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_EZ HEAT HEAT_2 CRM1_C Motif Other DBs NCBI-GeneID:  104433139 NCBI-ProteinID:  XP_010044097 LinkDB All DBs Position 1:20937023..20968784 Genome browser AA seq 1298 aa AA seqDB search MVAIVASATPRERLAGLVGSAKASPDIPSKLGRLRDLKEDLLQDDPVLLAEFLPQLLDLL SDRFSPVRKFIAQIIGEIGIKQLEFLPEMVPVLISLLTDESPPVARQAISCGIDLFRHTF ETIAIQGLYTSDLDDSLESAWEWMLKFKDKVYSIAFQSGSDGIKLSALKFVQAIILLYTP DPNGSLEPPSDQRLEGNLLGFNASWLRGGHPILNVGDLATEASKSLVLLLDQLRSPTVKS LCNLTIVVLINSVSAIAKERPSYYGRILPVLLGLDPTSSVTKGAHVSGVRLALKNAFHSC LGSTYPGVAVWHDQLLDAVREMNDGPVVEQALDQDYKINGSLEVKEEPSVSNEEKPSISP HESTQSNRGRKRGETEDHTIEVDVSGKRIKPSPSMSEESSNELNRKGTVNQEENASSGAL SSKAESDSGAVHQLVAMFGALVAQGEKAVQSLEIIISTISADLLAEVVMANMCHLPPERP KADEDEEGMQDVFSLSSAFPQISSLLNAEQKPEKPDDLPAVAATNDVVLQTDKTNEVESS ILPTALPTSADASAGAEMGSVMMSIDIHEDRNLESEIPGLASSSHSAGHSENRPDSSLAS MGIEDNGQEQDTSQSGKSLGESIPSISNDRCEELSPRPPAVDDNIPVSSSVTSVGLSSHV MLPKMTAPVVDLTDEQKDQLQKSAFTRIIDAYKEVALAGGSEVRSSLLSYLGVEFPLELD PWLLLHQHISSDYVNHEGHELTLRLLYRLFGEAEVERDFFSSTTASSSYESLLLNVAETL KDAFPPSDKSLSRLLGEVPYLPQSVLKLLGSLCSPGNLEKSEKELQAGDRVTQGLSAVWS LILLRPPIRDSCLKISLQSAVHHLEDVRMKAIRLVANKLYPVSSIAQKIEDFAKEMLLSV ISTGPLEKVALEGKDSDVERPLQESATGEASNEDRSSDTSQLHAVESIAISDAQRCMSLY FALCTKRHSLFREIFVIYGGASAAAKQAIHRHTPILVRTMGPSSELLEIISDAPGGSENL LSQVLHSLTDGIVPSPELVLTVRKLYDSKLKDIEILMPVLPFLPKDEVLLIFPQLVNLPT DKLQAALLRILTGSSHTGPLISPPEILIAIHGIDPDRDGIPLKKIIDACNACFEQRQIFT QQVIAKVLNQLVEQIPLPLLFMRTVLQAIGAFPALVDFVMEILSRLVNKQIWKYPKLWVG FLKCAASTKPQSFTVLLQLPPAQLENALNRMPALKEPLVAHASQPNIRSSLPRSLLVVLG IAPDLQTPGHAQTSQAQTGDAGTSDKEVVNEKDSSNAS NT seq 3897 nt NT seq  +upstreamnt  +downstreamnt atggtggcgatcgtggcctccgcgactccccgggagcggctggcgggcctcgtcggctcc gccaaggcgtcccccgacatcccctcgaagctcggccgcctccgcgacctgaaggaggac ctcctccaggacgaccccgtcctgctcgccgagttcctcccccagctcctcgacctcctc tccgaccgcttcagccccgtccgcaagttcatcgctcagataattggcgaaattgggatt aagcagctggaatttctgcctgaaatggtgcctgttttgatttcgctcttgactgatgag tcgccgccggttgctcgccaagctataagctgcggcattgacttatttcgtcacaccttt gagacaattgcgatccagggactatatacaagtgatctagatgattcactggagtcagct tgggaatggatgttgaaattcaaggataaagtatactcaatagctttccagtcgggaagt gacgggataaagttatcggcactgaaatttgttcaagcaatcattctactctacacgcct gatcctaatggatctttggagcccccttcggatcagcgcttagaaggaaatttgttgggc ttcaatgcatcatggcttcgtggtggtcatcctatattaaatgtaggggatttggctaca gaagctagtaaaagtcttgttttattgcttgatcagctgaggtctccaacagtgaaatct ctctgcaatctaacaatcgttgtgcttattaatagtgtttctgcaatagccaaggaaagg ccttcatactatggacgcattttgccggttcttcttggtttggatccaacaagttctgtt acaaagggtgcacatgtatctggagtacgccttgcacttaaaaatgcttttcattcctgc ttagggagcacctatccgggggttgcagtgtggcatgatcagttacttgatgccgtgagg gagatgaacgatggaccagtagttgagcaagcccttgaccaagactacaagataaacgga agtttagaagtaaaagaggagccttcagtttctaatgaagagaaaccatcaatatcaccc catgaatctacccaaagtaatagagggcggaaaagaggggaaacagaggatcacactatt gaggtggatgtctctggaaaacgaatcaaaccaagtcctagcatgtctgaggaatccagt aatgaattgaacagaaaaggcacagttaatcaggaagaaaatgcttcaagtggagcactc tcttccaaagcagagagtgattctggagctgtgcatcaactggttgccatgtttggtgcc ttggttgctcagggtgaaaaagctgttcagtctctggagatcattatttccactatatct gcggacttgctggctgaggtggtcatggcaaatatgtgtcatctcccgcctgaacgtcct aaagctgatgaagatgaagaggggatgcaagatgttttttcactttccagtgcttttcca cagatatcttctttactgaatgctgaacagaagcctgagaagccagatgatcttcctgcg gtggcagcaacaaatgatgttgttcttcaaacggataaaactaatgaggttgagagttct attttgccaactgctttaccaacttctgctgatgcttcagctggagcagaaatgggctcc gtaatgatgtcgattgatatccatgaagatcgaaacttagagagtgaaatacctggtctt gcttcatccagccatagtgctgggcactcagaaaaccggcctgattcctcattagcatcc atgggtattgaagataatggtcaagagcaagatacaagtcagtcggggaaatcattagga gagtcgattccatcaatttcaaatgatagatgtgaggagcttagccccagaccaccggct gtcgatgacaacattccagtctcctcatctgtaacttctgtgggattatcttctcatgtt atgttacccaagatgacggcccctgttgttgatttgactgatgaacagaaagatcagttg cagaaatcggcattcacccgcattattgacgcgtataaggaagttgcattggctggaggt tcagaagttcgctcttctttgctttcttatcttggagttgagtttcccttggaattagac ccatggctactgctacatcagcatatttcatcagattatgtgaatcacgagggacatgag ttgacattgcgtctcctctacagattatttggagaggcagaagtggaacgtgactttttc tcttccacaactgcttcctcttcatatgaatcactgcttttaaatgtggcagaaacactg aaagatgcttttccaccttctgacaaatctctaagcagattgcttggtgaagttccttat cttccgcagtcagttttgaaattattaggtagcttgtgttctcctggtaatctggaaaag tccgagaaggagctacaagctggagatcgggtcactcagggtctgagtgctgtttggagt ctaatcttgctccgccctccaattcgagattcttgcttgaaaatctctttgcagagtgca gttcatcatttggaggatgtgcgcatgaaggcaatccgtctggtagcaaacaaactgtat cctgtatcatccattgctcaaaaaatagaagactttgcaaaggaaatgttgctttcagtg attagcactgggcctctggaaaaagtggcacttgaagggaaggattctgatgtagaaaga cctttacaagaaagtgcaacaggggaagcaagcaatgaggatagatcatctgatactagc caattgcatgctgtagaaagcatagccatctctgatgcccagcgctgcatgtccttgtat tttgctctttgcacaaagagacactctctttttcgcgaaatatttgtcatctacggaggt gcatctgcagcagctaagcaggcaattcaccgtcatactcctattttagtccgaacgatg ggaccatcatctgaacttcttgaaataatatcagatgctcctggaggaagtgaaaacctc ttgtcacaggttttacactccctgacagatgggatagttccttctcctgaattagtactt actgtgaggaagttatatgattccaaattgaaggatatagagattctaatgcctgttttg ccattcttaccaaaagacgaggtcttgctaatctttccacagcttgtcaatcttccaact gataaattgcaagctgcacttcttcgtatattaacgggatcatctcatacaggtcctcta ataagtcctccggaaatcttgattgctatccatgggattgaccctgacagggatgggatt cccttgaagaagatcatcgatgcatgcaacgcttgctttgagcaacggcagatattcacg caacaagtgatcgcaaaggtcttgaatcaactggttgaacaaattcctcttcctttgttg ttcatgcgtacagtgttacaagcaataggtgcctttcctgcattggtggattttgtaatg gagattctttcccgccttgtgaacaagcagatatggaaatatcctaaactgtgggtggga tttttgaagtgcgctgcctcaacaaagccccagtcatttactgtgctactacagctgcct cctgcacagttagagaatgccttgaataggatgcctgcactcaaggaacccttggtagct catgcctcccagcccaacatacgctcctctcttcctaggtctcttctagttgttttggga attgctccagatttgcaaactccaggtcatgcgcagacaagtcaagctcagacaggggat gctggtacttcagataaggaagttgtaaatgagaaggattcatcaaatgctagctaa

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