Eucalyptus grandis (rose gum): 104433236
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Entry
104433236 CDS
T03547
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104433236
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
104433236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
104433236
NCBI-ProteinID:
XP_010044221
UniProt:
A0A059D704
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Position
2:complement(45590969..45613835)
Genome browser
AA seq
1602 aa
AA seq
DB search
MDQPPQRSSSASRAYQVHPSRAAINDLFNLYLGRNSRHRADDSVREPPNKAQKRVVAFNR
DLPPQNDQFIVDFQQLQNQFADQDQLRSMTESVIISLVGLCRNHAPRAEFLLFALRSLCG
IGYINWDTFLPSLLSSVSSTELLVGQGSQSMPVVSATSLSQSERVASSGAIPNSNFQPSN
PASPLSSVHVIGSPGQSTIEPSSGATMSPVKSSDISFSGQHAAVRTGSSVRDSGVSSLRQ
LCCKIILIGLDFNLKPVTHSDIFSHMLNWLVNWDQRQHGMDESNVIKSWRPDKALIEWLH
SCLDVIWLLVEEDKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQML
DQHLHCPTFGTQRILTLTTPNVSGEAVGNLRYSPITYPSVLGEPLNGEELATSIVRGSLD
WERALRCIRHAIRTTPSPDWWKRVLLVAPCYRPSVQPPTPGAVFTSEMICEATIDRIIEL
LKLTNSEINCWSEWLIFSDIFFFLMKSGCIDFVDFVDKLFVRLTEADQHILRTNHVTWLF
AEIIRVELVGNALNSDSRKVETIKKILSFHREDRGSDPNNPQSILLDFIGSCQTLRIWSL
NTATREYLNNEQLQKGKQIEEWWRQVGKGDRMMDYMNMDERSIGMFWVVSYTMAQPVYDA
VMNWLSSAGVTELLPGSNMPNERVMREVSPIPMTLISGFSMNLCLKLAFQMEETLFSNQV
VPSIAMVETYTRLLLTAPHSSFRSHISQLAQRNPALLSKPGVTILLFEILNYRLLPLYRY
QGKTKALMYDVTKIIAALKGKRGDHRVFRLTENLCMNVIFSLRDFFSVKREGKGPTEFTE
TLNRMTVITLAILIKTRGVADADHLLYVQTMLEQILATSQHTWSEKTLRYFPSVLRDALA
GRIDKKGLVIQAWQQAETTVINQCTQLLSPSGEPNYVTTYTSHSFPQHRQYLCAGAWILM
HGHPENINTTNLVRVLREFSPEEVTANIYTMVDVLLHQIQMELQHGHSMQDLLFKTSTNL
AFLIWTHELLPLDILLLALIDRDDDPHALRIVISLLDRQELQQRVKQYILNRGPPEHWTY
TGTFKRVELQKALGNHLSWKDRYPPFFDDIAARLLPVIPLIVYRLIENDAMDQAEAVLAV
YSPFLAYHPFRFTFVRDILAYFYGHLPGKLIVRILKVLDLSKIPLSESFPQHISSSNPVM
CPPLDYFATLLMGLVNHVIPPLSSDAKSVSVGDTSNNSARAPHNKTLPAQPGQMSASEGQ
KAFYQIQDPGTHTQLVLETAVIELLSLPVSASQIVSSLVQIVVNIQPTLIQSSNCLHGAP
NGVGQGSVLPTSPSGGSTDSLSGSRSTPSVSGLSTSNFVWRSAYTCQQLSCLLIQACGLL
LAQLPTEFHSQLYLEATRVIKESWWLTDIKRSLGELDSAVGYALLDPTWAAQDNTSTAIG
NIVALLHSFFSNLPQEWLDGAQAIIKHLRPITSVAMLRIAFRIMGPLLPRLANAHSLFNK
ILTLLLTTLVDVFGKNAQPSNHVEASEIKDLIDFLHHVVHYEGQGGPVQANSKPRPEVLA
LLGKTSERLRPDVQHLFSHLKPDINTSIYAATHPKLAQNSGQ
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggatcagccgccgcagcgatcgagctcggcctcgcgggcctaccaggtccatccgtct
cgcgccgccatcaacgatctcttcaacctctacttaggaaggaacagccgccaccgagcc
gacgactccgtccgcgaacccccgaataaggcgcagaagcgtgtcgtggcttttaacagg
gaccttcctcctcagaatgaccagttcattgtggacttccagcaacttcaaaaccagttt
gctgaccaagatcaactgcgatccatgacagaatctgtaattatatctttggttggactg
tgcagaaatcatgcaccacgggcagagtttcttctctttgctctacggagcttgtgtggt
attggttacattaactgggacacatttctgccttctcttctttcttcagtttcgtcaact
gaacttttagtgggtcaggggagccagtctatgcctgtagtatcagcaacaagcttatca
cagtctgaaagggtagcatcatcaggcgcaatccccaattcgaactttcagccttccaat
cctgcatctccattgtcatcggttcatgtcattggttctcctggtcagtcaacaattgaa
ccatcatctggtgcgacaatgtcaccggtaaaatcatccgatatctccttctctggtcaa
catgccgcagtgagaactggttcatctgtaagagacagtggtgtgagcagcctacgtcag
ctatgctgcaagattatcttgataggtcttgactttaatttaaaaccggtgactcactca
gacatattctcacatatgcttaattggcttgttaattgggatcaaagacaacatggaatg
gatgaatccaatgtcatcaagtcctggagacctgacaaggcactgatagaatggctacac
agttgtttggatgtgatttggctattggttgaggaggacaaatgtcgagtgcccttttat
gaattgctacgcagtggcttgcagttcatagagaacataccggatgatgaggccttattc
acccttatcttggagatccataggcggagggatatgatggcaatgcacatgcagatgtta
gatcagcaccttcattgtcctacatttggaactcaaaggatactaaccctcactactcct
aatgtgtctggtgaagcagttggaaacttacggtattccccgatcacatatccaagtgtg
cttggagaaccactaaatggagaggaactagcaacatcaattgtacggggaagtttggat
tgggaaagagcattgcgatgtataagacatgctattaggactactccatcgcctgattgg
tggaagcgtgtgcttttggtggctccttgctatagaccttcagtacaaccaccaactcct
ggtgctgtttttacctctgaaatgatatgcgaggcaacaattgataggattatcgagcta
ttgaagttgacaaattcagagataaattgctggtcagagtggctcatcttttcagatatc
ttctttttcctaatgaagagtgggtgtatcgattttgttgattttgtggacaaactattt
gtgcgacttacagaagccgatcaacatattcttcgtacaaatcatgtgacttggctattt
gctgaaattattcgagtcgagctcgtgggaaatgctttgaattcagattctagaaaggtg
gagacaatcaagaagattttgtcatttcatcgagaagacagaggctcagatcctaataat
cctcaaagtatcctacttgattttattggcagttgtcagactttacgaatttggtcactg
aatacagcaacgagggaatatttgaataatgagcagcttcagaaaggaaagcagatagaa
gaatggtggaggcaagtgggcaaaggagatcgcatgatggactacatgaatatggatgag
agatcaatagggatgttttgggttgtttcttacaccatggctcaaccagtttatgacgca
gtgatgaactggttatcctctgctggagttacggaattattaccaggttctaatatgcca
aatgagagggtaatgagggaagtaagcccaataccaatgaccctaatctctgggttctca
atgaacctatgtttaaaattggcgtttcagatggaggagactttattttccaaccaggtt
gtgcctagtattgctatggtggaaacatataccagactgctgctcactgcccctcactca
tcatttcgctctcacatcagtcaattggctcagagaaatccggccttgttgagtaagccc
ggagttacaattttgctatttgagattttgaactatcgcttacttcctctctacagatac
caagggaaaaccaaagctttgatgtatgatgtcacgaaaattattgctgctctcaaaggg
aagcgtggggatcatcgtgtatttagattgactgagaacttatgcatgaatgtaattttt
tcactgagagatttcttttcggtgaaaagggaagggaagggtccaactgaatttactgaa
actctgaatagaatgacggtcattaccctagcaatactcattaaaactcgtggtgttgct
gatgctgatcaccttctatatgttcaaacgatgctagaacaaatactagcaactagtcaa
catacatggtcggaaaagacactacgctatttcccttctgtgcttcgcgatgccttggca
gggcgaattgataagaagggccttgtcattcaagcatggcagcaggcagagacaacagtc
ataaaccaatgcacccagcttctttcgccatctggagaacctaattatgtgacaacctat
actagccatagttttcctcagcatcgtcaatatttatgtgctggagcgtggattctgatg
catgggcatcctgaaaacattaacactacaaatctggtgcgtgtgttgagggagttctct
cctgaggaagtgactgctaatatctacaccatggtggatgttcttcttcatcaaattcag
atggaacttcaacatgggcattccatgcaggacctcttatttaaaacaagtaccaacctt
gcatttctcatttggacccatgagttgcttcctttggacatactactactggcacttatt
gaccgtgatgatgacccccatgccttacgcattgtgatcagccttcttgaccgacaagaa
cttcaacaaagagtgaaacaatatattttgaatcgtggacctccggaacattggacttac
actggaacttttaagcgtgttgaactgcaaaaagcgcttgggaatcatctctcgtggaaa
gataggtatcccccattttttgatgatattgcagcccggttgcttcccgtgatccccctt
attgtttacagactgattgaaaatgatgccatggatcaggctgaagcagtcctggctgtt
tactctccatttctagcttatcacccttttcgattcacatttgttcgtgacatactcgca
tatttctatggtcatcttcctgggaagctcattgtccgaattctgaaagtacttgatctt
agcaagattccactttctgagtcattcccacaacacattagttcctcaaatcctgtcatg
tgcccacctctggattattttgctactctgctaatgggtctggtcaaccatgtcattcct
ccattgagtagtgacgcaaaatctgtttctgttggggatacttcaaacaattcagctcga
gctccacataacaaaactttgccagcccaacctggccaaatgagtgcctcagaaggtcaa
aaggcattttatcaaattcaagatcccggcacacacactcagctggttctggaaactgct
gtgatagagctgctttcacttcctgtgtctgcatctcaaattgtgtcatccctagttcaa
attgtcgttaacatccaacctaccctaattcaatctagtaattgtctgcatggagctcca
aatggtgttggacaaggttcagtcctaccaacttcaccttcaggtggaagcacagattcc
ttgagtggcagcagatctactccttcagtttctggtttaagtacctctaactttgtctgg
cgaagtgcttatacatgtcaacaactgtcttgcttgttgatccaagcttgtggtcttcta
ttagctcagcttcccactgaatttcactcgcaactttatttggaggctacgcgcgtaatt
aaggagagttggtggctgactgatataaagaggtcattgggtgaactagactctgctgtt
gggtatgcattgttggatccaacttgggctgcacaagataatacctcaactgccattggt
aacatagttgcgctgcttcattccttctttagtaatctcccgcaagaatggctggatggg
gcacaagcgatcatcaaacacctcagaccaattacatccgttgcaatgttgagaatagca
tttcgtataatgggtccattgcttccaagacttgccaatgctcactcccttttcaacaag
atacttacattgttgttaaccacattggtggatgtctttgggaagaacgcacaaccctca
aaccacgttgaagcatcagaaataaaggatctcatcgattttctccatcatgtcgtccat
tatgaaggtcaggggggacctgtgcaggcgaacagcaagcccagacctgaggtacttgct
ctccttggtaaaacatccgagagacttagaccagacgtgcagcaccttttttctcacttg
aaacccgacataaacacttccatctatgccgccacccacccgaagcttgcacaaaattca
ggacaatga
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