Eucalyptus grandis (rose gum): 104433366
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Entry
104433366 CDS
T03547
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104433366
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egr01009
]
104433366
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104433366
03019 Messenger RNA biogenesis [BR:
egr03019
]
104433366
03041 Spliceosome [BR:
egr03041
]
104433366
Enzymes [BR:
egr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104433366
Protein phosphatases and associated proteins [BR:
egr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
104433366
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104433366
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104433366
Spliceosome [BR:
egr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104433366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
104433366
NCBI-ProteinID:
XP_010044385
UniProt:
A0A059DD51
LinkDB
All DBs
Position
1:12688921..12691867
Genome browser
AA seq
308 aa
AA seq
DB search
MNSRGTKEISMDAVLAEVGGLIERLLERRNKKGKHIQLVEPEIRRLCIVAKQVFLAQPNL
LELEAPINICGDIHGQYPDLLRIFESGGFPPDSNYLFLGDYVDRGKQSIETICLLLAYKI
KFPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVAAVIDDKIICM
HGGLSPELVNLDQIRVLERPMDVPDQGLLCDLLWADPDREIKGWGENDRGVSYTFGADKV
AEFLRKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGALMNVDPSLLCS
FQIVRPWG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaattcccgaggaacgaaggagattagcatggatgctgtcctggcagaagttggaggt
ttgatagagagattgttggaacgaaggaacaagaaaggaaaacacattcagctggtcgag
cccgaaattcgtcggctttgcatcgtcgccaagcaagtctttcttgcgcagcctaatctc
ctcgaattagaagcccccatcaacatctgtggtgacatacatggacaatacccagaccta
ctgagaatattcgaaagcggtggtttcccaccagattcaaactacttgttcctcggagac
tacgtcgacagagggaagcaaagcatagagaccatctgcctcctccttgcctacaaaata
aagttcccggagaacttctttctcctccgagggaaccatgagtgtgcctccattaaccgg
atctatggcttctatgacgagtgcaagcgtcgcttcagcgtccgtctgtggaagatcttc
acggattgcttcaattgcttgccagtggcagcagtgattgatgacaagatcatttgcatg
cacggtggactctcgccggagcttgtgaacttagatcagatcagggttctggagaggccc
atggatgtgccggaccaggggctattgtgtgacctactttgggcggatcctgacagagag
atcaaagggtggggcgagaatgacaggggcgtttcctacactttcggtgctgacaaagtg
gcagagttcctaaggaaacacgacctcgatctaatatgtcgtgctcaccaggtggttgaa
gatggttacgaattctttgcagaccgacagctggttaccatattttcagctcctaattac
tgtggggaattcgacaatgctggggcactaatgaacgtggatccgagtttgctatgctcg
tttcagattgtcaggccatggggttga
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integrated database retrieval system
