Eucalyptus grandis (rose gum): 104433521
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Entry
104433521 CDS
T03547
Name
(RefSeq) Fanconi anemia group D2 protein homolog
KO
K10891
fanconi anemia group D2 protein
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104433521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egr03400
]
104433521
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
104433521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
DUF5344
Motif
Other DBs
NCBI-GeneID:
104433521
NCBI-ProteinID:
XP_010044602
LinkDB
All DBs
Position
1:complement(12104407..12116783)
Genome browser
AA seq
1559 aa
AA seq
DB search
MNSHRSRVKNFGAFSLPFLPPSRESGPNLVDFRGGAAETLRRRRASPPPSALRHGVPAPA
RAFSEETPFFQPPFPQPKPPKTAAAGDEPPPATPPPPPSAAASEVAGASPEEKMVSVLAD
AGCTLLNRDGPPCLPSDVHRFRAHLQRLLSSPSNNALRSDFVAGFSDHVQSPKNLLRVLT
SSDHGGLLATRSNSLARNLLLVPSIQVDLQNILLEKLPEFFDVIPQPSGASLSLKDDVAR
LIINHFRWLDFIVDSNSFVDKLMQVLSICPLHLKKEIIGSLPEMIGEQNYDTVVNSLEQM
LQEDTAIIVPVLDSLSNLHLDDQLKAQVVTIALSCLRTIDGEHMPFLLRFLLLSATPANV
RRIISHIREQLKFIGVSNHHSGQNRKLKGKSVADGIEASILNTLRLGLRFKNILCQEILK
EFNSLKRPQDHKVIDIWLIMVMYMNGESVQRSIKKIFMRKIVDDCIPLVMIEQCLHGHAS
LVQDYFPSFLSLCEYILSCKEQKARTFGIHMYTCLFQEVADPYSRQEILGALVTHVGSGV
NPEVGSALETMNLLVAKHPLELIRLSSYINGILDYLEGFSIENLYKVYEVFSNLALSIRS
SGDSLGSSFANELLIVVRKQVNHPDMNYKKMGLIGSLKIVSCIGDANNILSPDPSQKSNV
AEALELLETCLKSCKQLALPLTLFYDEMTALLNQRNLHPAIMEWIGKNAGELESTYLLDL
EDGKLPLNDSYGGLEGELWMNLDGDISPICVNILPLTSSSLQSPLLQILPANILLLSTVE
RSTNQGSLGGIDALLGCPLHLPSSKYFSKAVWQSLTGKQKQIVCLSLYYAANWIRELLNA
FSSQVGGKFECTSQATKEDIINKLLKRLRNLVFLESLLNYHLESYPLCLPELHLHLEQPK
SSNLSQLYPVGHLEKKNELKRAHDLTNPNKCKKLTDTEPSSCTDRKLHQPTIVDVLKKAR
VTTSQEVQNDDSSSPHMNGGRTTLEDQHPHDSDETLTLEISAATTVLELQRSKFRPLLLQ
CYSILAFSKKEETCCSDPMAELPLYLFLLRDLHKKLDYFNTKCNGLSAASGFAGFTLEEF
LNNIRPLFPSLKRHLDRAMSILGEGDNNCRGHWENQSINAGNPNLPDCVLTVTSATTLVI
KEVLHCLSEILNLPDFQRDTTILSDLLRAFQPIEMKESNISSMQPHPLPGSIEHLYCGAY
SFLENILDMACSFSFMAASETLLTLEAALTSAQNLNIKSTGANCKFLQSGFNQEVLLNLR
RRLGTSAEKILKHRWDVENVENSWKSKGDRVQKVLHVYLENSESTSEVLNELALSVLPQA
LVCKTAEDDLLHGFASLCSATFHVWYRVLHEVNLTRFNALVKEVGLRSKPDAGKLGNDAK
HDVIRGLLIKLLDPVNVVVSLVSMCRTCDKVTMHAMAVKYGGKFVDSFLKVFEFLEVQFQ
EHQEPVIQLVKELQKATRTLQTLCSEAKGLKQMSVTTKIPATKRSLERLLFRVKALLHNS
SSGCAFWMGNLKHKDLAGQVVSSQAYIDDRDFSVGEDAREENADEPPVGEPDEETEEQG
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacaccgctcgcgagtgaaaaattttggcgccttttctcttccctttctccct
ccgtcgcgagagtccggaccgaacctcgtcgatttccgcggcggagccgccgaaaccctc
cgccgccggcgagcttctcctccgccctccgccctccgccatggtgttcctgcaccagca
agggccttctcggaagagacacccttctttcaacccccgtttccccagcccaagcccccc
aaaaccgccgccgccggtgacgagccgccgccggcgactcctccgcctccgccgtctgcg
gcggcgagcgaagtggcgggcgcgtcgccggaggagaaaatggtgtccgtgctggccgat
gcgggctgcacgctcctgaaccgcgacggcccgccctgcctcccgtccgacgtccacagg
ttccgcgctcacctccagcgcctcctctcttctccttccaacaacgctctgcgctccgat
ttcgtcgccggattctccgatcacgttcagtctcctaagaatctcctcagggttctcaca
agttcagatcatggcggtcttttggccactagaagcaacagccttgctcggaacctccta
ctggtcccctcaattcaagttgatcttcagaacatactccttgagaagcttcctgaattc
ttcgacgtgatcccccaaccctctggggcatctttgtcgctcaaggatgatgttgctcgg
cttatcatcaaccactttagatggcttgattttattgttgattctaattcgttcgttgat
aagttgatgcaagtcctgtccatttgccccttacatttgaagaaagagattattggatca
ttgcctgagatgattggtgagcagaactatgatactgtggtcaattccctggaacaaatg
cttcaagaggacacagcaattatagtgcctgtccttgactctctttccaatcttcatttg
gatgatcagttgaaagctcaggttgtcacgatcgcattatcgtgccttagaacaattgat
ggagagcacatgccctttttacttaggtttttattgctttcagcaacgcctgcaaatgtt
cgaagaatcatctcacacattcgtgagcagttgaaatttattggagtatccaatcatcat
agtggccaaaacaggaaactaaagggaaagtctgttgcagatggcattgaggcctccatc
ctcaatacattgagattgggcctaagatttaagaatattctctgccaagaaattttaaaa
gaattcaacagccttaagagaccgcaggatcacaaagtcattgacatatggctcattatg
gtcatgtacatgaatggcgagtctgtccagagaagcataaaaaagatcttcatgagaaag
attgttgatgattgcattccattagtgatgatagaacaatgtctccatggccatgcaagc
ctagtacaggactactttccatcatttctctctctgtgcgagtacattttgtcttgcaaa
gaacaaaaagcaaggacctttggcattcacatgtacacttgtctgtttcaagaagttgcg
gatccatattcaaggcaggaaattcttggagcattagttactcatgtgggaagtggtgta
aatcctgaagttggttctgctttggagaccatgaatttactggttgcaaagcatcctctg
gagttaatccgactttcttcttatataaacggtatcttggactatttggaaggatttagt
attgaaaacctgtataaggtgtatgaggttttcagcaatcttgcactatcaatcagatca
agtggagattcattgggatcatcgtttgcaaatgagcttctgatagtcgttcgaaagcag
gtcaatcatccagatatgaattacaagaagatgggattgattggaagtttgaagatagtt
tcatgcattggcgatgcaaataacattctctctccagatccatctcagaagtccaatgtt
gcggaggccttggagctcttggaaacatgtttaaagtcctgcaaacaattggccttgcca
ctgaccctcttttatgatgaaatgactgccctgttgaatcaaagaaatctgcacccagca
attatggaatggattggtaaaaatgctggagaattagaatctacatatcttttggatctt
gaagatggcaagttgcctctgaatgattcctatggcggattagaaggggaactatggatg
aacttggatggtgatatatctccgatatgcgtgaacattttgcctttgacttcctcatca
ttgcagtctcctctactgcagattctccctgccaacattctcttactttctacagttgaa
agatcaacaaatcaaggatctcttggagggattgatgcactccttggatgtcccttgcac
cttccttcctctaagtatttctccaaagctgtgtggcagtctctcacaggaaagcagaag
cagatagtgtgcctctcactctattatgcggctaactggattagagaactgctcaatgct
ttctcctcacaagtcggtggaaaatttgaatgtacttctcaagctacaaaagaggatata
atcaacaaattgctgaagcgattgaggaacctagtatttttggagagcctgttaaactat
cacttagagtcttacccactatgcctgccggagctccatcttcacttagagcagcccaag
tcttcaaatttaagccaactttatccagttggacatctggaaaagaagaatgagctgaag
agagcacatgatctcactaatccaaacaagtgcaaaaaactgactgacactgaaccaagt
tcatgcaccgatagaaagcttcatcagcccactatagtggatgtgttaaagaaggcaaga
gtaacgacaagccaagaagtgcaaaatgatgattcttcaagtccacacatgaatggaggg
agaactacattggaagatcagcatcctcatgattctgatgagacattaaccctagaaatt
tctgcagctactacagttctggaactgcagagatccaagtttagaccacttctgcttcag
tgttactccattttggcattctcaaagaaagaggagacctgttgctcagatcccatggct
gagttacccctttatctgttccttctgagagatcttcataagaagctggattacttcaat
actaaatgcaatggcttgagtgctgcatctggatttgctggttttaccttggaagagttc
ttaaataatatcagaccactctttccttctctgaagaggcatttagatagagcaatgagt
atccttggagaaggtgataacaattgcagaggacactgggaaaatcagagcattaatgct
gggaatccaaatcttcctgattgtgtgctcacagtgacttcagcgacaactttggttata
aaggaagtacttcattgtcttagtgagatactaaatcttccagattttcaaagggacaca
acaatcctttcagatttgctacgtgcttttcagccaattgaaatgaaggaaagtaatatt
tcaagcatgcagccccatccgttgcctgggagcatagaacacttatattgtggtgcttat
tcatttctggagaacattttggacatggcctgctccttttccttcatggcagcatcagaa
actcttcttacgcttgaagcagctctgacctcagcccagaatcttaacattaagtcgact
ggggcaaactgtaaatttctacagtcaggattcaatcaggaagtacttctaaacctgcgt
agaagacttggaacttctgctgagaagattctaaagcatagatgggatgttgagaatgtg
gagaacagttggaagagtaaaggagaccgagtacagaaggttttgcacgtttacttggag
aacagtgaatctacatccgaagtgctaaatgaactcgccctctctgtgttgccgcaggcc
ttggtgtgcaaaacggccgaagacgatttgcttcatggcttcgcatccttgtgctctgcg
acatttcatgtgtggtaccgggttttgcatgaagtcaaccttactcgattcaatgctttg
gttaaagaagttggtcttaggagtaaaccagatgcaggtaaactgggaaatgatgccaaa
catgatgtcataagaggacttcttattaaattgctggaccctgtgaatgtggttgtatcc
ctagttagtatgtgcaggacatgtgacaaggtgactatgcatgctatggctgtcaaatat
ggtgggaagtttgtcgattcttttcttaaagtttttgagtttttggaggtgcagtttcaa
gagcaccaagaacctgtgatacagctggtaaaagagctccagaaggccacaaggacattg
cagacactgtgctctgaagcaaagggtttgaaacaaatgtctgtcaccaccaaaattcct
gctacgaaaaggtctctagagcgacttttatttcgtgtcaaggctcttctccacaattca
tcaagtggatgcgcattttggatgggtaatttgaaacataaagacttggcaggccaggtt
gtgagctcccaggcctacatcgatgatcgagacttcagtgtcggtgaagatgcgagggaa
gaaaatgcagatgagcctcctgtaggggagccagatgaagaaacagaagaacaagggtaa
DBGET
integrated database retrieval system
