Eucalyptus grandis (rose gum): 104433544
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Entry
104433544 CDS
T03547
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104433544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104433544
Spliceosome [BR:
egr03041
]
Complex C
Other components
Step II factors
104433544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
eIF2A
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_SCAP
PAN2_N
Motif
Other DBs
NCBI-GeneID:
104433544
NCBI-ProteinID:
XP_010044638
UniProt:
A0A059D7L6
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Position
2:complement(51511907..51515251)
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AA seq
585 aa
AA seq
DB search
MDLLQSYAEDNDGDLGPHSSPEPSPPRLLPSKSAAPKVDDTTLALTVAKTNQTLARPIDP
SQHAVAFNPTYDQLWAPICGPAHPYAKDGIAQGMRNHKLGFVEDAAIGSFLFDEQYNTFQ
RYGYAADPCASTGNEYVGDLDALKQNDGISVYNIRQQEQKRRRIELKKEDEGQGAEGPGE
EEEAAAAEAENPATDTWLMKNKKSPWAGKKEGLQGELTEEQKKYAEEYAKKKGEERGEGG
REKAEVVSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAI
RFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYDK
NIKYWDTETGKVISTFSTGKIPYVVKLHPDDEKQNILLAGMSDKKIVQWDMNTGQITQEY
DQHLGAVNTITFVDDNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN
WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGRCWF
WDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctgcaatcttacgcggaggataacgacggtgatctcggccctcactcctcg
ccggaaccctcgccgccccgcctcctcccctccaaatccgccgccccgaaggttgacgac
accacgctcgccctcaccgtcgcgaagaccaaccaaaccctagcccgccccatcgacccg
tcccagcacgccgtcgccttcaaccccacctacgaccagctatgggccccaatctgcggc
cccgcccacccctacgccaaggacggcatcgcccagggcatgcgcaaccacaagctcggc
ttcgtcgaggacgccgccatcggctccttcctcttcgacgagcagtacaacacgttccag
aggtacgggtacgccgccgacccctgcgcctccacggggaacgagtacgtcggcgacctc
gacgcgctcaagcagaacgacggcatctcggtgtacaatatccgccagcaggagcagaag
cggcggcggatcgagctgaagaaggaagacgaggggcagggcgcggagggccccggcgag
gaggaggaggccgccgctgccgaggccgagaaccccgcgaccgacacgtggttgatgaag
aacaagaagtcgccctgggcgggcaagaaggaagggctgcagggggagctgacggaggag
cagaagaagtatgctgaagagtacgcgaagaagaagggcgaggagaggggcgagggcggc
agggagaaggcggaggtggtttccgataagagcacattccatggtaaagaggagagggat
tatcagggcaggtcgtggatcgcgccgcccaaggacgccaaggcaacgaatgatcattgt
tatatacccaagagattggtgcacacctggagtgggcacaccaagggcgtgtctgccatt
aggttcttccccaagcatggtcacttgatcctctcagctgggatggatactaaggtgaag
atctgggacgtgttcaattcgggtaagtgtatgaggacttacatgggtcattcgaaagct
gttagggacatatcgttttgtaatgacgggactaagttcttgactgccggttatgataag
aacatcaaatattgggatactgaaaccgggaaggttatctctactttttccactgggaaa
attccttatgtggttaagttgcatccggacgatgaaaagcagaatattttgttggcggga
atgagcgataaaaagattgttcagtgggatatgaatacggggcagattacacaggaatat
gatcagcatttgggtgcggtgaatacgattacctttgttgatgataaccggaggtttgtg
acgtcaagcgatgataagtcccttcgtgtttgggaatttgggatccctgtggttattaag
tatataagtgagcctcatatgcattctatgccctcgatctcgctgcatccaaatacgaat
tggcttgcagcacagagtctggacaatcagattcttatttatagcactagggaaagattt
cagctcaataagaagaagaggtttgctggccacattgtggctggctacgcctgtcaagtt
aacttctcaccagatggtcgttttgttatgtctggagatggagagggtagatgctggttc
tgggactggaagagttgcaaagtcttcagaactctgaaatgtcatgagggggtatgtatt
gggtgtgagtggcatccactggaacaaagtaaagtagcaacctgtggctgggatggctta
atcaagtattgggactga
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