Eucalyptus grandis (rose gum): 104433547
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Entry
104433547 CDS
T03547
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104433547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104433547
Spliceosome [BR:
egr03041
]
Complex A
U1 snRNP components
U1 related factors
104433547
Complex B
104433547
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Nrap_D5
DUF3741
Motif
Other DBs
NCBI-GeneID:
104433547
NCBI-ProteinID:
XP_010044641
UniProt:
A0A059D934
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All DBs
Position
2:complement(51500214..51506739)
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AA seq
829 aa
AA seq
DB search
MVTGGVIPSGPPPVMAYQVPAPGQPPNPALRQYMPMPNGYAHMPGVPQPPPGIPSYSPYA
SMIRPAFAPRPPGPIGVLPVISRPPVPVPGVRPVNPPVVRPALVPVTPAEKPQTTVYVGK
IAPSVENDYMLSLLRLCGPVKSWKRAQDPSNGAPKGFGFCEFESAEGVLRALRLLSKFNI
DGQELVLNVNQATREYLERYVEKKRENAKKLNESEAAVVAEKEANGASSTEKNESLEPNG
HDSKKDDSKNDDSDSGKKESHDNAPLGTVTDEDREADKEALQKLTSMIEERLKTRPLPPP
PLQVPADVLAITGTEAPAKSDSDADPSKNDAEDRHDEETTSDNKANSEHDKTEINSPDRN
RRYDRRSREHDRERDVKREKDREVERYEREAERERIRKEREQRRKIEEAEREYEERLKDW
EYREREKEKQRQYDRERDKERERKRKKEIIYDEEDEEEDSRKRWHRSALEEKRKKRLREK
EDDLADRRKEEEEIAEAKKLAEEEKKHQLQQQREALKLLNGDIVSRHEKSVKAEEPTGEI
VQHGIGGIAGHEDPAGDEMSRIGVGDNSVIAMGASDVQANNNAPAKKLGFGLVGSGKRTA
VHSVFYEEDDDDRDKEKKMRPLVPIDYSTEEMQAIQSPPGQSQPNLAAAAEFAKQLSTAN
MKEEKPESERERSRRSHDRSSQREKDRSSLDGNRVKDENRDKNLERGRERTTDNKKLLDA
KQLIDMIPRTKEDLFSYEINWTLYDQHELHERMRPWISKKIMEFLGEEETSLVDYIVTST
REHVKATEMLETLKSILDEEAEMFVLKMWRMLIFEIKKVETGLHLRSRS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgggcggggtcattccgtcggggcctccgcctgtgatggcgtatcaagtcccg
gcgcccggtcagcctccgaacccggcgctgagacagtacatgcccatgcctaatggatac
gcgcacatgcccggcgttcctcagcctccacctggaattcctagttattctccatatgcg
agtatgattcggcctgcatttgctccacggccacctgggcctataggtgtgctcccagtt
atttcccgtccccctgtcccggttcctggagttcgcccagtcaatcctccggttgttcgg
ccagctcttgttcctgtcactcctgctgaaaagcctcagacaactgtttatgttggcaag
attgcaccttctgtcgaaaatgattatatgctttcacttcttcgattatgtgggccagtc
aagagttggaaacgtgctcaagatccctcaaatggagctcctaaaggctttggcttttgt
gaatttgaatctgctgaaggggttcttcgtgcattacgtcttctcagtaaatttaacata
gatgggcaggagctggtgttaaatgtcaaccaagcaaccagagaatatttagagcgatat
gtagaaaagaaaagggaaaatgcgaagaagctcaatgagagtgaagctgctgttgttgcc
gagaaagaggccaatggtgcatctagtactgagaagaatgaatctctggagcctaacgga
catgactcaaagaaagatgattcaaagaatgatgattctgattctggtaagaaagaaagc
catgataatgcccctcttgggacagtgacagatgaggacagggaagcagacaaagaggct
ttgcagaagcttacgagcatgatagaagaaaggttgaagaccagacctcttcctcctcct
cctctgcaagtgccagcagatgttttagcaattactggcacagaagcacctgccaagtct
gattctgatgctgatccttccaaaaatgatgcagaagacagacatgatgaagagacaacc
agtgataacaaggcgaatagtgagcatgataagactgaaattaactctcctgatcggaac
agaagatatgacaggagaagcagggagcatgacagagaacgagatgtaaaacgtgaaaag
gatagggaagttgagagatatgaaagagaggcagagcgagagcggattcgcaaggagaga
gaacaaagaaggaaaattgaggaggctgagcgtgagtatgaggagcgtcttaaggattgg
gaatatcgagaaagagagaaagagaaacagcgtcaatatgacagggagagagataaagaa
agggagcgcaaacggaagaaggagattatttatgatgaagaagacgaagaggaggattcc
cgaaaaaggtggcataggagtgccttggaggagaagaggaagaagaggctacgagagaag
gaggatgacttggctgacagaagaaaggaagaggaggaaatcgctgaggccaagaagctg
gctgaggaggaaaagaagcatcaactgcagcaacagagagaagcgctgaaacttttgaat
ggtgacatagtgagtagacatgagaaaagtgtaaaagctgaagaaccaacgggtgaaatt
gttcaacatggtattgggggcattgctggtcatgaagatcctgcaggtgatgagatgtca
agaattggtgtgggggataactcagtcattgcgatgggtgcatcagatgtgcaggcaaac
aataatgctcctgccaaaaaattgggctttggccttgttggttctggtaaaagaacagct
gtccattctgttttctatgaggaagacgatgatgacagagacaaggagaaaaagatgagg
cccttggttccaattgattactcaactgaggaaatgcaggccatccaaagtcctcctggg
caatcacaaccaaacttagctgctgcagcagaattcgcaaagcagctttctactgccaat
atgaaagaagagaagcctgaatctgaaagggagagaagtagacgatctcatgataggtca
agccaacgggagaaagaccggagcagtctggatggtaatcgagttaaagatgagaacaga
gataagaatcttgaacggggaagagagcggaccacagataacaagaaacttttggatgcc
aagcaattaattgatatgatccctaggaccaaggaggatttattctcgtatgagataaac
tggaccttgtatgaccagcatgagctgcacgagagaatgaggccttggatctcaaagaaa
atcatggagttcttgggagaggaggaaacatcgctggttgattacatcgtaactagtact
cgggagcatgtgaaggccactgaaatgctggagacacttaagtccatattggacgaggaa
gcagaaatgtttgtgctcaagatgtggaggatgctcatatttgaaatcaagaaggtagag
acgggactccacctgaggtcaagatcctga
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