Eucalyptus grandis (rose gum): 104433789
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Entry
104433789 CDS
T03547
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104433789
03041 Spliceosome [BR:
egr03041
]
104433789
03036 Chromosome and associated proteins [BR:
egr03036
]
104433789
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104433789
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104433789
mRNA cycle factors
Common to processing body (P body) and stress granule
104433789
Spliceosome [BR:
egr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104433789
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104433789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
GRIM-19
Motif
Other DBs
NCBI-GeneID:
104433789
NCBI-ProteinID:
XP_010044956
UniProt:
A0A059D9C5
LinkDB
All DBs
Position
2:54231436..54238337
Genome browser
AA seq
634 aa
AA seq
DB search
MRASWADLAASSAADNVGAGSSANNGAAVAASAPGPGRSAYVPPHLRNRPPSADPPAPAN
TGPALGTDRPGSGGSRWGAPRNDFRAGGGAGGGGGGGGRAGGWGGRGGGWGGRDREVNPF
GDDVDTPQPFDEQENSGINFDAYEDIPVETSGDNVPPPVSTFAEIDLGEAVNQNIRRCKY
VKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMKSSHQVQRPPRGARTVY
PLALILSPTRELSMQIHEEAKKFAYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGR
LVDLLERARVSLQMIRYLTLDEADRMLDMGFEPQIRKIVEQMDMPPSGERQTMLFSATFP
KEIQRLAADFLYNYIFLAVGRVGSSTDLIVQRVEFVHDADKRSYLMDLLHAQRDNVVQGK
QQSLTLVFVETKKGADSLENWLCHNGFPATSIHGDRTQQERESALRSFKTGRTPILVATD
VAARGLDIPHVSHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNSSMARSLAEL
MQEANQEVPAWLSRYAARSSSYGGGRNRRSGGGRFGGRDFRRDSSFNRGGSDYHGGGGSN
SFGYGGSSGGYGGSSGGYGGGGGGYGPGVTSAWD
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcttcatgggcagatttggctgcgtcttccgcagctgacaatgtaggggctgga
tcctctgccaacaatggtgctgccgttgctgcctcggctcctggtcctggtcgaagtgct
tacgtccctccgcatctgaggaaccgtccaccttcggcagatccaccggcacctgctaac
actgggccagctcttggtactgatcggcctggttctggcgggtcacgctggggagctccc
aggaatgattttcgagcaggaggtggagcaggaggtggcggcggtggtgggggccgtgct
ggtggatggggtggcagaggtgggggttggggtgggagagaccgggaagtgaatcctttt
ggagatgatgtggacactccgcaaccttttgatgagcaagagaattctgggatcaatttc
gacgcgtatgaagacattccggtggagacgagcggggataacgtaccccctccagtgagt
acttttgcagaaattgatctaggtgaagctgttaatcagaacattcggaggtgtaagtat
gtgaaaccaacgcctgtgcaacgacatgccataccaatttccctgggagggcgtgatctg
atggcttgtgcccaaactggatctggcaagacagctgctttctgttttccaatcatcagt
ggtataatgaaaagcagccaccaagtacagaggccaccacgtggtgcgcgtactgtctac
ccacttgctcttattctttctcctacgagggagctctcaatgcaaatacatgaagaagct
aaaaagtttgcctatcaaactggtgtcagggtggttgttgcttatggaggagcaccaata
aatcaacagctaagggaattggagagaggtgtggatatacttgttgctactcctgggaga
ttggtggatttgctggagagagctcgagtttcgttacagatgatcagatatttgacgctg
gatgaggcagatcgaatgcttgatatgggttttgagcctcagataagaaaaatagtagaa
caaatggacatgccgcccagtggagaaaggcaaacaatgttgttcagtgccaccttccct
aaggaaattcagagattggctgctgattttctatacaattatatctttttggctgttgga
agagttggatctagcactgatctgattgtccagagagttgagtttgttcatgatgctgat
aaaagaagttatctcatggatcttcttcacgcacaaagagacaatgttgttcaggggaag
caacaatctttgacattagtttttgttgagacaaagaagggggctgattctctagaaaat
tggctatgccataatggttttccagctacttctattcatggagatagaacacaacaggaa
agagaatcagctctccgctcatttaagactggcaggactccaattctagttgctacagat
gttgcagctcgtggtcttgatattccacatgtttcccacgtgatcaattttgatcttccg
aatgacatagatgattatgtccaccggattggacgaacaggacgagcagggaagtctggt
ttagctactgccttctttaacgagagtaactcatcaatggcaaggtcattagctgagctg
atgcaagaagcaaatcaggaagttccagcttggctctccaggtatgctgctaggtcgtcg
tcatatggtggaggaaggaatcgtcgttctggtggaggccggtttggtggtcgtgacttc
cggagggatagctcttttaataggggtggatctgactaccatggtgggggcggcagcaac
agttttggatatggaggatcatctggagggtatggaggatcatcgggaggctatggtgga
ggaggaggaggttatggccctggtgtcaccagtgcatgggattaa
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