Eucalyptus grandis (rose gum): 104433862
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Entry
104433862 CDS
T03547
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
egr03015
mRNA surveillance pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104433862
09122 Translation
03013 Nucleocytoplasmic transport
104433862
03015 mRNA surveillance pathway
104433862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104433862
03041 Spliceosome [BR:
egr03041
]
104433862
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104433862
Spliceosome [BR:
egr03041
]
Common components
Common spliceosomal components
Cap binding complex
104433862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
104433862
NCBI-ProteinID:
XP_010045036
LinkDB
All DBs
Position
2:complement(55049572..55061776)
Genome browser
AA seq
867 aa
AA seq
DB search
MSSWKSLLLRIGDKCPEYNSSDPKEHIETCYGALRRELDHSGSDILSFLLQCAEQLPHKI
PFYGTVVGLLNLANEDFVKKLVDTTHTNFQDALDSEDCNRIRILMRFLTVIMCSKVLQPS
SIVVVFETLLSSAATTVDEEKGNPSWQARADFYITCILSCLPWGGAELFEQVPEEIERVM
VGIEAYLSIRKHVSDDGLLFFEDEDENEEGLKEKDFLEDLWGRIQILSSNGWKLNSVPRP
HLSFEAQLVAGKSHDFGSVSCPPQPDPPSTLSVITYGKQKHDAELMYPQRIRRLNIFPED
KTEDLQPIDRFVVEEYLLDVLFYFNGCRKECALYMVGLPVPFRYEYLMAETIFSQLLLLP
HPPFKPMYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRMRLILWFSHHLSN
FQFIWPWEEWAHVLDLPKWAPQRVFVQEVLEREIRLSYWEKVKQSVENAPGLEELLPPKG
GTNFIYGIDEGSEQTEEQRLSAELSKMVKGRQTARELISWIEESVSPTHGLESTLKVVVQ
TLLDIGSKSFTHLITILERYGQVIAKICPDDERQAMLIEELSSYWKNNPQMRAITIDRMM
GYRLISNVAIVRWVFSPVNIDQFHISDHPWEILRNAVSKTYNRIVDLRKEISSLKKDVIS
AEEVSAKARADLESAEQKLMLVDGEPTVGENPARMKRLKSYAEKAKEKEVSIRENLEVKE
ALLGRAYNENEALFLALYKKLSSVLKERLPEPSKARTLRELKSIHADETAVELEEPSAME
MDDENGRAKESHSNGEKASDVYKVGEEEQWCISTLGYVKAFSRQYASEIWPLLEKLEAEV
LTEDVHPLFRRAIYSGLRLPVNGYPSS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggaagagcctcctcctccggatcggcgacaagtgcccggagtacaacagc
tcagatcccaaagagcacatcgagacgtgctacggcgctcttcggagggagctggatcat
tccgggagcgacattctttcctttcttctgcaatgcgccgagcagttgccgcacaagatt
cctttctatggcaccgtggttggtttgctgaacttggcaaatgaggacttcgtaaaaaaa
ttagtcgatacaacccacaccaattttcaggatgctttggattccgaagactgcaataga
atccgtatattgatgcggtttctgactgttatcatgtgtagtaaggtcctacaaccaagt
tcaatcgtagtggtttttgagactttattatcatcagctgcaactactgtggatgaggag
aaagggaatccctcttggcaggcacgtgctgacttctatataacttgtatcttatcctgc
ctaccatggggaggtgcggagctctttgagcaagtgcctgaggagattgagagagtcatg
gttggaatagaagcttatttgagcattagaaagcatgtatctgatgatggcctgttgttt
tttgaggatgaagatgagaatgaggaaggactcaaggaaaaggatttcttggaggacctg
tggggtcgtattcaaattctttccagcaatggatggaaactgaacagtgttccaagacct
cacctctcatttgaagctcagcttgttgctggaaagtctcatgattttggctctgtcagc
tgccctccacagcctgatccgccttcaacactttctgttatcacttatgggaaacagaaa
catgatgcagaattgatgtatcctcaaagaatccggaggcttaatattttccccgaggac
aaaactgaggatcttcaaccaatagatcgctttgttgtggaagagtatctgctggatgtg
ttgttctactttaatggatgtcgaaaggaatgtgctttatacatggttggtctgcctgtt
cccttcagatatgagtatcttatggcagagacaatattctcgcagttacttttgctgcca
cacccccctttcaagccaatgtactacacgctggtcataattgacctttgtaaggctctt
cctggagccttccctgcagtagtagcaggtgcagttcgtgctttgtttgagaaaattgcc
gatttggatatggagtgccgcatgaggctcatcctttggttttcacaccacctatccaac
tttcaatttatatggccttgggaggagtgggctcatgtcttggaccttccaaaatgggca
ccccaacgtgtatttgttcaggaggttttggagagagagattcgtttgtcatactgggag
aaagtcaagcagagtgttgagaatgcgcctggattagaagagctgcttcctcccaaggga
ggtacaaacttcatttatggcatagatgagggcagtgaacaaactgaagagcaaaggctc
tctgcggaacttagcaaaatggtaaaaggtaggcaaactgcacgtgaattgatctcatgg
atcgaagaaagtgtttctccaactcatggtttggagtctactctcaaagtggtggtacaa
actcttcttgacattggctctaagagtttcactcatttgattaccatcctcgagagatat
ggccaagtcattgcaaaaatttgccctgatgacgaaagacaagcgatgttgatagaggaa
ttgagctcatactggaagaacaatcctcaaatgagggctatcactattgatcggatgatg
ggttaccgactaatatcaaatgtggcgattgtgagatgggttttctctcctgtcaacatc
gaccagtttcatatatctgatcatccatgggagattctcaggaatgcagttagcaagaca
tataatcgtatagtggatctaaggaaagagatttcatctcttaaaaaggatgtcatatct
gctgaggaagtaagcgcaaaagcgagagcagatcttgagagtgcagaacaaaagctcatg
cttgtggatggtgaacccactgtaggcgaaaatcctgcgaggatgaaacgcttgaaatca
tatgcagaaaaggcaaaagagaaggaagtatctattcgtgaaaatttagaggtgaaagag
gctcttcttgggcgtgcctataatgaaaatgaggcgttgttcctagctttgtacaaaaag
ttatcgagtgtgctgaaggaacgtcttccagaaccatctaaagctagaactttgagggaa
ctcaagtctattcatgcagatgaaacagctgttgagctcgaggaaccttcagccatggaa
atggatgatgagaatggaagagctaaagaaagccattcaaatggtgagaaggcaagcgat
gtctacaaagtcggtgaagaggaacagtggtgcatatccactttgggttatgtcaaggcc
ttctctaggcaatatgcttccgagatatggccgctcttggagaagctggaagcagaagta
ttgacagaagatgtacatccacttttcagaagagcgatctattcgggcttgcgtcttcca
gttaatgggtacccatctagttga
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