Eucalyptus grandis (rose gum): 104434033
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Entry
104434033 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin
KO
K23288
syndetin
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104434033
Membrane trafficking [BR:
egr04131
]
Protein recycling
Others
EARP complex
104434033
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Vps5
Motif
Other DBs
NCBI-GeneID:
104434033
NCBI-ProteinID:
XP_010045284
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Position
2:56281206..56296390
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AA seq
1107 aa
AA seq
DB search
MQPSLFPFGTVVGNPFLFDGDLSEGGFESSRVFFLVPFLLFQGGGMDLSKVGEKILSSVQ
SARLLGLLPSGSDRPEVPARAAAAAAVARALAGLPPHERFSLSSSSTELSSIYGSKLPGP
PVADLEEEFYDEEFDPVRHILEHIPGEENELTYFEKQATLRLAQLDRVSECLSRNVVEHH
EVMVKGMDLVRELEKDLKVATVICMNGRRHLTSSMNEVSRDLIVNSNSKKKQALLDILPA
LTELHHALDMQMSLETLVEEGDYCKAFQVLSEYLQLLDGFSELSAIKEMSRGVEVWLGKT
LQKLDSLLLGVCQEFKEEGYVTVIDAYALIGDVSGLAEKIQSFFMQEVLSETHSLLKSIV
LEDRELNQQSSRLTYSDLCHQIPESKFRHCLLRTLAVLFELICSYYRIMSFQLEEKIWLY
GLNPNRMEVGTSVNQVNTDAEVLDSREHVLQSEIADGVTSSSLPSESASTNSSKTTGTFP
MGTPDTDGVGRNDVSDASSSGSPWYQLRKDATNFLSQTLQRGRRNLWQLTTSRVSVLLSS
PAVCSTSIHQFLRNYEDLSVFILAGEAFCGFEAVEFRNKLKAVCENYFLAFHRQNVYALK
MVLEKENWLILPPDAARVITFAGLVGDGAPLIVPFRANASLLHPNKSAESVDSISKKSMF
SHWLQSGNPFLQKLTCGSKELQSVSGTNGAVSSDYDGQVNDCHDDKLPSRSTGANHVNGH
STSEEENEDLLADFIDEDSQLPSRISKPNVLKRHSQSNDEDSTAQTGSSLCLLRSMDKYA
RLMQKLEIVNVEFFKGICQLFEIFFHFVYETFGQQNTYSSGKGFNDSPNYRLKTALSRIA
QDCDQWIKPQAVSLSSSSPTSLNDVTPTSPNAAFGQLGLKERCAGADTLLLVARMLHKSK
AHLQSMLLQNNAAVVDDFYVHMVDAVPDLVEYIHRTTARLLLHINGYVDRIANAKWEVKE
LGLEHNGYVDLLLGEFKHYRTRLLHGGIRKEVQDVLLDYGLEIVAETLIEGLSRVKRCTD
EGRALMSLDLQVLINGLHHFVSANVKPRFQTVETFIKAYYLPETEYVHWARAHPEYTKNQ
IVGLVNLVAAMKGWKRKTRLEVLEKIE
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgagcctgttccccttcggcaccgtcgtgggcaacccgttcctgttcgatggc
gatttgagcgagggtgggttcgagagctctagggttttcttcctggtccccttcttgctg
ttccaaggtggcgggatggatctgtccaaggtcggagagaagatcctgagctccgtccag
tccgcccggctgctcggcctcctcccttccggttccgatcgccccgaggttccagctcga
gctgcagcagcagcagctgtagctcgtgctttggcaggactgccccctcatgaaaggttc
tctctctcttcaagttcgacagaattgagctcaatatatggaagcaagcttcccggtcca
ccggttgcagatctggaagaagaattctatgatgaggagtttgatccggtgaggcatatc
ttagagcacatccccggggaagaaaatgaattgacctattttgagaaacaggcaactctt
aggttagcacaactggatagagtttcagaatgcttgtcccgcaatgttgtggagcatcat
gaagtgatggtgaagggaatggatttagtgagggaacttgagaaggacttgaaggttgcg
actgtcatctgcatgaatggacggaggcatctgacctcatcgatgaatgaggtttcaagg
gatctaattgttaattctaactcaaagaagaaacaagcacttttggacatacttcctgct
ttgacagaacttcaccatgcgctggatatgcaaatgtcacttgaaactcttgttgaagag
ggggattactgcaaggcatttcaagtgttgtctgagtatttgcagctcttggatggattt
tcagagctgtcagcaataaaagagatgagccgaggtgttgaggtctggctggggaaaact
cttcaaaagctggattctcttttgctgggtgtgtgccaagaatttaaagaggagggctat
gtaactgttatcgatgcctatgcattaattggggatgtttctggtcttgctgagaagata
cagagcttttttatgcaggaagttctttcagaaactcactctctattaaaaagtattgtg
ctcgaggatcgagaattaaatcagcaaagcagtaggcttacctacagtgatctatgccat
caaattccggaatctaagttcagacactgtctgctgagaactctagctgttttatttgag
ttgatttgttcctattacagaatcatgagctttcagctggaggaaaagatttggttgtac
ggtcttaatccaaatcgaatggaagttggcacctctgttaaccaagtcaatacagatgca
gaagttctggattcccgagaacatgttttgcaatccgaaattgcagatggagtcaccagt
tcatctctgccaagtgagtctgccagtacaaactcttctaaaactacaggtacttttcct
atgggtaccccagacacagatggtgtgggaaggaatgatgtcagtgatgcatcaagcagt
ggatccccttggtatcagctgcgaaaagatgcaacaaacttcctgtcacaaaccctccag
agaggccgcaggaatctatggcagctcacaacaagtcgtgtgtctgttttgctttcttcc
ccagctgtttgttccacaagtattcatcaattcttgagaaattatgaagaccttagtgtc
tttatcttggctggggaagccttttgtgggtttgaagcagttgaatttaggaacaagttg
aaggccgtctgtgaaaattactttttggcatttcatcggcaaaatgtttatgcactcaaa
atggtcttggaaaaggagaattggctgatattgcccccagatgcagcacgtgtaattact
tttgctggtttagttggtgatggagcacccttgattgtaccattccgtgctaatgctagt
ttgctccatcctaacaaatcagctgagtcagttgatagtatttcgaagaagagtatgttt
tcccattggcttcagagtggaaacccattcttgcaaaagttaacctgcggctcaaaagaa
cttcaaagtgtcagcggaactaatggggcggtctctagtgattacgatgggcaggttaat
gattgtcatgatgataaactgccttcaagaagtaccggagcgaatcatgttaacgggcat
tcgacttctgaagaagaaaatgaagatctcctggcggacttcattgacgaggatagtcaa
cttcccagccgaatttctaagcccaatgttttgaaaaggcattcacagtcaaatgatgaa
gacagcactgctcaaacaggatcttctctttgtcttttaaggtcaatggataagtatgca
agactaatgcagaagttggaaatagtgaatgttgagttttttaagggaatctgccaactg
ttcgaaatcttttttcattttgtttatgaaactttcggccagcaaaacacttattcaagt
gggaaaggctttaacgattctcctaactatcgactgaagacagctttatccagaatagca
caagattgtgatcagtggataaaaccccaagctgtctcattgtcatcctcctcacctaca
tcattgaatgatgttacaccaaccagtcctaatgcagcatttggccagttgggtctgaag
gagaggtgtgcaggtgctgatactttattgcttgttgctcgaatgctacacaagtccaaa
gctcaccttcagtcaatgcttttacaaaataatgcagctgtagttgatgatttctacgtg
catatggtggacgctgtaccggatcttgtcgaatacattcatcgaacaactgcaagattg
ctgctccatattaatgggtatgttgatcgaattgccaatgcaaagtgggaagtgaaagag
ctaggcctagaacataacgggtatgttgatctgttattgggagagttcaagcactacagg
acaaggctcttgcatgggggaatccgcaaggaggttcaagacgtccttttggattatgga
cttgaaatcgttgctgaaactctcattgaaggtctgtccagggtaaagaggtgtactgat
gaaggacgggctcttatgtctttggatcttcaggttttgataaatgggctacatcatttt
gtatctgcgaatgtgaagcccaggttccagacggtggaaactttcatcaaggcttactac
ctaccggagactgaatatgttcattgggcgcgagcccacccggagtacactaaaaaccag
attgttggactggtcaacctcgtcgcagcaatgaaaggttggaagagaaaaacaagattg
gaagtgttagagaagattgaataa
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integrated database retrieval system
